RNA id: TU90810



Basic Information


Item Value
RNA id TU90810
length 257
lncRNA type inter_gene
GC content 0.32
exon number 1
gene id G79752
representative True

Chromosome Information


Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 2631050 ~ 2631306 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTGGTTTTCAAATGTTATAGAAACTACAAATGTAAAATTAGTAGTAGGTCAGTAGGTCAAAAAAAGGCTAAAAAACCAACATATTTTCATTGGAAAATGTGCCACCTACATTTTGGCAAAACTCCAAAAACATACATTAAAGGCCATTAAAGGGATAGTTCACCCAAAAAAATCACCCTCAAGTTGTTCCAAACCTATATAAATTTCTTTGTTCTGCTGTACACAAAGGAAGATATTTGGAAGAATGTTTGTAACCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU90729 lncRNA downstream 28433 2586452 ~ 2602617 (-) True G79672
TU90802 lncRNA downstream 165167 2465669 ~ 2465883 (-) True G79744
TU90798 lncRNA downstream 168806 2461984 ~ 2462244 (-) True G79740
TU90794 lncRNA downstream 174388 2456349 ~ 2456662 (-) True G79736
TU90783 lncRNA downstream 187283 2443422 ~ 2443767 (-) True G79725
TU90813 lncRNA upstream 1182 2632488 ~ 2632836 (-) True G79755
TU90814 lncRNA upstream 1851 2633157 ~ 2633376 (-) True G79756
TU90815 lncRNA upstream 2098 2633404 ~ 2633727 (-) True G79757
TU90819 lncRNA upstream 9038 2640344 ~ 2640555 (-) True G79761
TU90735 lncRNA upstream 168824 2800130 ~ 2812494 (-) True G79678
CI01000013_02606100_02629603.mRNA mRNA downstream 1447 2606100 ~ 2629603 (-) True CI01000013_02606100_02629603
CI01000013_02536846_02547039.mRNA mRNA downstream 84011 2536846 ~ 2547039 (-) True CI01000013_02536846_02547039
CI01000013_02529628_02531898.mRNA mRNA downstream 99152 2529557 ~ 2531898 (-) True CI01000013_02529628_02531898
CI01000013_02515682_02518699.mRNA mRNA downstream 111814 2515460 ~ 2519236 (-) True CI01000013_02515682_02518699
CI01000013_02484671_02489919.mRNA mRNA downstream 140790 2484671 ~ 2490260 (-) True CI01000013_02484671_02489919
CI01000013_02718442_02730091.mRNA mRNA upstream 87000 2718306 ~ 2731589 (-) True CI01000013_02718442_02730091
CI01000013_02733870_02751654.mRNA mRNA upstream 102400 2733706 ~ 2751654 (-) True CI01000013_02733870_02751654
CI01000013_02834348_02858912.mRNA mRNA upstream 202948 2834254 ~ 2858912 (-) True CI01000013_02834348_02858912
CI01000013_02870258_02903686.mRNA mRNA upstream 238952 2870258 ~ 2903686 (-) True CI01000013_02870258_02903686
CI01000013_02912132_02916617.mRNA mRNA upstream 279885 2911191 ~ 2916617 (-) True CI01000013_02912132_02916617
TU89207 other downstream 2604153 26528 ~ 26897 (-) True G78296
TU90747 other upstream 181941 2813247 ~ 2815392 (-) True G79690
TU91381 other upstream 933865 3565171 ~ 3567537 (-) True G80262
TU91391 other upstream 1088127 3719433 ~ 3723607 (-) True G80271
TU91525 other upstream 1272761 3904067 ~ 3906240 (-) True G80399
TU91578 other upstream 1433636 4064942 ~ 4066017 (-) True G80443

Expression Profile