RNA id: CI01000013_02733870_02751654.mRNA


Basic Information

Item Value
RNA id CI01000013_02733870_02751654.mRNA
length 1181
RNA type mRNA
GC content 0.56
exon number 3
gene id CI01000013_02733870_02751654
representative True

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 2733706 ~ 2751654 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AATGTGTTGGCAAAGGCCCTGTACGACAATGTGGCAGAGTCTCCGGATGAGTTGTCCTTTCGGAAGGGCGACATCATGACCGTCCTGGAGCGGGACACGCAAGGGCTGGACGGCTGGTGGCTGTGCTCGCTGCATGGCCGTCAAGGCATTGTTCCTGGCAACCGGCTGAAGATTCTTGTGGGCATGTATGATAAACAGCAACAGCAGCAGTTACAGCAGTCGTCGAACCAGCCCAGCCCAACCCAGAGCCAACTCAACCTGTCTCAGAGTGCCTACAACAAGCTCCCCCCCTCGTCCCAGTACACAGCCATGCACCCCGCCTTCGCCTCCTCCAGCTCCGCCAACTCTAGCAACCCAGACGGAGTCTACATGCTCCCCCCCAGCCACGGCCTGTCCACACCCTCTAGCCTCTACCAGGTGCCCACCGGCCCCCAACCTCCACAGCCCCAACCCAAAGCCCCCGCTGTGGCACAGAAACAAAGCCAGGCACAGTACCCTCCCACCCCGCAGGATGTCTACCAGGTGCCCCCCTCCATTAACGTTCCAGGCCAGGACATCTACCAGGTGCCACCCTCTGCAGGAGGGCCGTGTCCCGGGCAGGATGTGTACCAGGTGCCACCCTCTATGAACCAGACACAGGACATTTACCAGATTCCGTCATCAACAGAGAGGAGCTGGGACTCTCTCAAACCAATGGGAAAGGGCACTGAGCCATATGCCACGGCTGCCGCAGTTGCGGGGGAAATGAAGTGTAAAGATGGAAGGGCTGAACCTAATGGCCATGTAGCTGCTGTGATTGTGACTCTTGGCCAGCTGTCATGGCGCGGGGCAACACAGTCAGACGGTCACCGCTCCCCTATTGTTTCCTTCCACACCATTGAGTGTTTGTCTCTTTGTGACATCATCATTACAGGCACTTCACCCCGCCCCCCAGAGATTGTTGTGACAGCTGGAGGCCTGGACACACCCACTCTCTATGATCAGACCCTTTCAGCTATATTGATGAGGGCTGAATGATGGCAGTCCACCATATGTGCCATCTCCGCTCCCCAGAGCAGCGCTCATTGATAATTCACATTATTGATCGATGGTCATTACAGCCGGCCCTTCAGAGGCTCTCAGCAGGATGGAGTGACTATTACTTAAAGCTAAGCACAGGTCTGAGAGGGCATTGAAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU90819 lncRNA downstream 93151 2640344 ~ 2640555 (-) True G79761
TU90815 lncRNA downstream 99979 2633404 ~ 2633727 (-) True G79757
TU90814 lncRNA downstream 100330 2633157 ~ 2633376 (-) True G79756
TU90813 lncRNA downstream 100870 2632488 ~ 2632836 (-) True G79755
TU90810 lncRNA downstream 102400 2631050 ~ 2631306 (-) True G79752
TU90735 lncRNA upstream 48476 2800130 ~ 2812494 (-) True G79678
TU90840 lncRNA upstream 133018 2884672 ~ 2884964 (-) True G79779
TU90908 lncRNA upstream 410956 3162610 ~ 3164376 (-) True G79842
TU90919 lncRNA upstream 440591 3192245 ~ 3194984 (-) False G79852
TU90929 lncRNA upstream 440591 3192245 ~ 3194815 (-) False G79852
CI01000013_02718442_02730091.mRNA mRNA downstream 2117 2718306 ~ 2731589 (-) True CI01000013_02718442_02730091
CI01000013_02606100_02629603.mRNA mRNA downstream 104103 2606100 ~ 2629603 (-) True CI01000013_02606100_02629603
CI01000013_02536846_02547039.mRNA mRNA downstream 186667 2536846 ~ 2547039 (-) True CI01000013_02536846_02547039
CI01000013_02529628_02531898.mRNA mRNA downstream 201808 2529557 ~ 2531898 (-) True CI01000013_02529628_02531898
CI01000013_02515682_02518699.mRNA mRNA downstream 214470 2515460 ~ 2519236 (-) True CI01000013_02515682_02518699
CI01000013_02834348_02858912.mRNA mRNA upstream 82600 2834254 ~ 2858912 (-) True CI01000013_02834348_02858912
CI01000013_02870258_02903686.mRNA mRNA upstream 118604 2870258 ~ 2903686 (-) True CI01000013_02870258_02903686
CI01000013_02912132_02916617.mRNA mRNA upstream 159537 2911191 ~ 2916617 (-) True CI01000013_02912132_02916617
CI01000013_02919679_02944235.mRNA mRNA upstream 167935 2919589 ~ 2944235 (-) True CI01000013_02919679_02944235
CI01000013_02999657_03003223.mRNA mRNA upstream 247619 2999273 ~ 3003580 (-) True CI01000013_02999657_03003223
TU89207 other downstream 2706809 26528 ~ 26897 (-) True G78296
TU90747 other upstream 61593 2813247 ~ 2815392 (-) True G79690
TU91381 other upstream 813517 3565171 ~ 3567537 (-) True G80262
TU91391 other upstream 967779 3719433 ~ 3723607 (-) True G80271
TU91525 other upstream 1152413 3904067 ~ 3906240 (-) True G80399
TU91578 other upstream 1313288 4064942 ~ 4066017 (-) True G80443

Expression Profile