Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000021_05808363_05825783.mRNA |
| length | 2220 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 15 |
| gene id | CI01000021_05808363_05825783 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000021 |
| NCBI id | null |
| chromosome length | 7014339 |
| location | 5808193 ~ 5825838 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0000186 | activation of MAPKK activity | biological_process |
| id | description |
|---|---|
| K04366 | RAF1; RAF proto-oncogene serine/threonine-protein kinase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU135104 | lncRNA | upstream | 6796 | 5796629 ~ 5801397 (+) | True | G118958 |
| TU135161 | lncRNA | upstream | 12471 | 5794856 ~ 5795722 (+) | True | G119001 |
| TU135118 | lncRNA | upstream | 22516 | 5782581 ~ 5785677 (+) | False | G118964 |
| TU135119 | lncRNA | upstream | 22675 | 5782581 ~ 5785518 (+) | True | G118964 |
| TU135234 | lncRNA | upstream | 126373 | 5681603 ~ 5681820 (+) | True | G119073 |
| TU135142 | lncRNA | downstream | 3452 | 5829290 ~ 5832011 (+) | True | G118982 |
| TU135248 | lncRNA | downstream | 21805 | 5847643 ~ 5847891 (+) | True | G119087 |
| TU135251 | lncRNA | downstream | 66468 | 5892306 ~ 5942271 (+) | True | G119089 |
| TU135257 | lncRNA | downstream | 73320 | 5899158 ~ 5905601 (+) | True | G119094 |
| TU135263 | lncRNA | downstream | 130804 | 5956642 ~ 5957424 (+) | True | G119100 |
| CI01000021_05791905_05792161.mRNA | mRNA | upstream | 15138 | 5791905 ~ 5793055 (+) | True | CI01000021_05791905_05792161 |
| CI01000021_05786615_05790109.mRNA | mRNA | upstream | 17255 | 5786615 ~ 5790938 (+) | True | CI01000021_05786615_05790109 |
| CI01000021_05748401_05769219.mRNA | mRNA | upstream | 38974 | 5748094 ~ 5769219 (+) | True | CI01000021_05748401_05769219 |
| CI01000021_05700274_05719435.mRNA | mRNA | upstream | 87431 | 5700274 ~ 5720762 (+) | True | CI01000021_05700274_05719435 |
| CI01000021_05632833_05637281.mRNA | mRNA | upstream | 170627 | 5632833 ~ 5637566 (+) | True | CI01000021_05632833_05637281 |
| CI01000021_05852098_05854690.mRNA | mRNA | downstream | 26260 | 5852098 ~ 5855141 (+) | True | CI01000021_05852098_05854690 |
| CI01000021_05980937_05993618.mRNA | mRNA | downstream | 155099 | 5980937 ~ 5993924 (+) | True | CI01000021_05980937_05993618 |
| CI01000021_06009872_06060664.mRNA | mRNA | downstream | 184034 | 6009872 ~ 6060871 (+) | True | CI01000021_06009872_06060664 |
| CI01000021_06069397_06074082.mRNA | mRNA | downstream | 243404 | 6069242 ~ 6074149 (+) | True | CI01000021_06069397_06074082 |
| CI01000021_06077681_06095590.mRNA | mRNA | downstream | 251571 | 6077409 ~ 6095726 (+) | True | CI01000021_06077681_06095590 |
| TU134547 | other | upstream | 918685 | 4842733 ~ 4886292 (+) | True | G118432 |
| TU133514 | other | upstream | 1772517 | 4033000 ~ 4035676 (+) | True | G117493 |
| TU133500 | other | upstream | 1850441 | 3956146 ~ 3957752 (+) | True | G117484 |
| TU133183 | other | upstream | 2479960 | 3269144 ~ 3328233 (+) | False | G117202 |
| TU135922 | other | downstream | 974306 | 6800144 ~ 6860606 (+) | True | G119701 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00042631 | False | 2258 | mRNA | 0.47 | 16 | NC_007134.7 | 4709802 ~ 4747271 (+) |
| eurasian perch (Perca fluviatilis) | TU292457 | True | 262 | lncRNA | 0.50 | 1 | NC_053132.1 | 26982585 ~ 26982846 (-) |
| striped catfish (Pangasianodon hypophthalmus) | TU292457 | True | 1165 | lncRNA | 0.42 | 2 | NC_047610.1 | 663922 ~ 665122 (+) |
| bowfin (Amia calva) | TU23711 | True | 1468 | lncRNA | 0.44 | 4 | CM030122.1 | 50559450 ~ 50563278 (+) |
