G119073


Basic Information

Item Value
gene id G119073
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 5681603 ~ 5681820 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU135234
GGTTATAGCAAGCTTGTTGAATATACATAGGGATTGAGAAGGTTTTGTTTTTAAAGAAAACCAGGCAGAATAGCTCTCTCTTTCGTGCTAAGAGCAGTTACACATGCTGGCGAGTTCATGTATTTGGCGAAGTGTTGGAGAGCGGTTGCATGTCCGAGGACATCCTGCTCCTTTCATCTGCTCCCTCCCTCCTTTGGGCTGAGGCCTGTCCTTCAAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135234 True 218 lncRNA 0.47 1 5681603 5681820

Neighbor

gene id symbol gene type direction distance location
CI01000021_05632833_05637281 COL9A3 coding upstream 44037 5632833 ~ 5637566 (+)
CI01000021_05607950_05611874 OGFR coding upstream 69043 5607950 ~ 5612560 (+)
CI01000021_05556724_05561020 SS18L1 coding upstream 120583 5556724 ~ 5561020 (+)
CI01000021_05542885_05545016 NA coding upstream 136007 5541357 ~ 5545596 (+)
CI01000021_05524969_05530651 LSM14B coding upstream 150571 5524816 ~ 5531032 (+)
CI01000021_05700274_05719435 NA coding downstream 18454 5700274 ~ 5720762 (+)
CI01000021_05748401_05769219 NA coding downstream 66274 5748094 ~ 5769219 (+)
CI01000021_05786615_05790109 NA coding downstream 104795 5786615 ~ 5790938 (+)
CI01000021_05791905_05792161 NA coding downstream 110085 5791905 ~ 5793055 (+)
CI01000021_05808363_05825783 RAF1A coding downstream 126373 5808193 ~ 5825838 (+)
G119072 NA non-coding upstream 921 5680399 ~ 5680682 (+)
G119049 NA non-coding upstream 101162 5580170 ~ 5580441 (+)
G118984 NA non-coding upstream 114496 5562205 ~ 5567107 (+)
G118995 NA non-coding upstream 162674 5518621 ~ 5518929 (+)
G118974 NA non-coding upstream 163160 5517379 ~ 5518443 (+)
G118964 NA non-coding downstream 100761 5782581 ~ 5785677 (+)
G119001 NA non-coding downstream 113036 5794856 ~ 5795722 (+)
G118958 NA non-coding downstream 114809 5796629 ~ 5801397 (+)
G118982 NA non-coding downstream 147470 5829290 ~ 5832011 (+)
G119087 NA non-coding downstream 165823 5847643 ~ 5847891 (+)
CI01000021_04886787_04893309 PLAGL2 other upstream 792095 4886337 ~ 4893474 (+)
G117493 NA other upstream 1645927 4033000 ~ 4035676 (+)
G117484 NA other upstream 1723851 3956146 ~ 3957752 (+)
G117202 NA other upstream 2353370 3269144 ~ 3328233 (+)
G117237 NA other upstream 2438239 3237854 ~ 3243364 (+)
G119701 NA other downstream 1118324 6800144 ~ 6860606 (+)

Expression


Co-expression Network