G118995


Basic Information

Item Value
gene id G118995
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 5518621 ~ 5518929 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU135155
ATGGGGTTATTAAAGTCCTTCTGAATTGAAGCAATGCGTTTGTGTAAAAAAAATATCCATATTTAACAAGTTACGAAGTAAAATATCTCCAGACCACCTTCCGTATTCAAATTATGAAAAAAGTGTAAACTGGCGTCGCGTCAGTTACACTTTTTCCATAAGTTGAATAGGGAAGGTGTAGGACGTAGCGTAAGCTTTTTGAAATGCAAGAGTTTTACACTTTCTTCGTACACTGAATACAGAAGGCGGTCTGGCAGAAGCTAGATATTTTACTTCATAACTTGTTTAAATATGGATTTTTTTTTTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135155 True 309 lncRNA 0.34 1 5518621 5518929

Neighbor

gene id symbol gene type direction distance location
CI01000021_05451019_05481032 NA coding upstream 37425 5451019 ~ 5481196 (+)
CI01000021_05392788_05403219 NA coding upstream 114521 5392302 ~ 5404100 (+)
CI01000021_05302737_05307812 NA coding upstream 209948 5302343 ~ 5308673 (+)
CI01000021_05244908_05282588 NTSR1 coding upstream 235694 5244731 ~ 5282927 (+)
CI01000021_05193252_05204766 SLCO4A1 coding upstream 313508 5192783 ~ 5205113 (+)
CI01000021_05524969_05530651 LSM14B coding downstream 5887 5524816 ~ 5531032 (+)
CI01000021_05542885_05545016 NA coding downstream 22428 5541357 ~ 5545596 (+)
CI01000021_05556724_05561020 SS18L1 coding downstream 37795 5556724 ~ 5561020 (+)
CI01000021_05607950_05611874 OGFR coding downstream 89021 5607950 ~ 5612560 (+)
CI01000021_05632833_05637281 COL9A3 coding downstream 113904 5632833 ~ 5637566 (+)
G118974 NA non-coding upstream 178 5517379 ~ 5518443 (+)
G119043 NA non-coding upstream 1811 5516508 ~ 5516810 (+)
G119042 NA non-coding upstream 3188 5515206 ~ 5515433 (+)
G119024 NA non-coding upstream 92540 5425754 ~ 5426081 (+)
G119022 NA non-coding upstream 96336 5422057 ~ 5422285 (+)
G118984 NA non-coding downstream 43276 5562205 ~ 5567107 (+)
G119049 NA non-coding downstream 61241 5580170 ~ 5580441 (+)
G119072 NA non-coding downstream 161470 5680399 ~ 5680682 (+)
G119073 NA non-coding downstream 162674 5681603 ~ 5681820 (+)
G118964 NA non-coding downstream 263652 5782581 ~ 5785677 (+)
CI01000021_04886787_04893309 PLAGL2 other upstream 629113 4886337 ~ 4893474 (+)
G117493 NA other upstream 1482945 4033000 ~ 4035676 (+)
G117484 NA other upstream 1560869 3956146 ~ 3957752 (+)
G117202 NA other upstream 2190388 3269144 ~ 3328233 (+)
G117237 NA other upstream 2275257 3237854 ~ 3243364 (+)
G119701 NA other downstream 1281215 6800144 ~ 6860606 (+)

Expression


Co-expression Network