G119022


Basic Information

Item Value
gene id G119022
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 5422057 ~ 5422285 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU135182
TGTTGACCTGCACAGTTTCTATTCTCAGCTCTGTTTCCATTTCTGTGATTCAAACACGAGCTCTAAAAATGGCTGGGTAAAAATGATCCCAACTGGCAACCTAGGGCTTGGTAAACTGGGCAGAGCACGTATTGGGTTAAACTAACCCAGCATGTTGGGTTATGCAATCTAACCCATCCGGCTGGTGTTTATTGAAGTCAAATGTCACTTAACACTGACTAGATTCTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135182 True 229 lncRNA 0.44 1 5422057 5422285

Neighbor

gene id symbol gene type direction distance location
CI01000021_05392788_05403219 NA coding upstream 17957 5392302 ~ 5404100 (+)
CI01000021_05302737_05307812 NA coding upstream 113384 5302343 ~ 5308673 (+)
CI01000021_05244908_05282588 NTSR1 coding upstream 139130 5244731 ~ 5282927 (+)
CI01000021_05193252_05204766 SLCO4A1 coding upstream 216944 5192783 ~ 5205113 (+)
CI01000021_05050240_05098803 NA coding upstream 322258 5048920 ~ 5102550 (+)
CI01000021_05451019_05481032 NA coding downstream 28734 5451019 ~ 5481196 (+)
CI01000021_05524969_05530651 LSM14B coding downstream 102531 5524816 ~ 5531032 (+)
CI01000021_05542885_05545016 NA coding downstream 119072 5541357 ~ 5545596 (+)
CI01000021_05556724_05561020 SS18L1 coding downstream 134439 5556724 ~ 5561020 (+)
CI01000021_05607950_05611874 OGFR coding downstream 185665 5607950 ~ 5612560 (+)
G118950 NA non-coding upstream 81227 5340614 ~ 5340830 (+)
G118945 NA non-coding upstream 82694 5339125 ~ 5339363 (+)
G118935 NA non-coding upstream 87717 5334127 ~ 5334340 (+)
G118916 NA non-coding upstream 101785 5318757 ~ 5320272 (+)
G118905 NA non-coding upstream 115809 5305954 ~ 5306248 (+)
G119024 NA non-coding downstream 3469 5425754 ~ 5426081 (+)
G119042 NA non-coding downstream 92921 5515206 ~ 5515433 (+)
G119043 NA non-coding downstream 94223 5516508 ~ 5516810 (+)
G118974 NA non-coding downstream 95094 5517379 ~ 5518443 (+)
G118995 NA non-coding downstream 96336 5518621 ~ 5518929 (+)
CI01000021_04886787_04893309 PLAGL2 other upstream 532549 4886337 ~ 4893474 (+)
G117493 NA other upstream 1386381 4033000 ~ 4035676 (+)
G117484 NA other upstream 1464305 3956146 ~ 3957752 (+)
G117202 NA other upstream 2093824 3269144 ~ 3328233 (+)
G117237 NA other upstream 2178693 3237854 ~ 3243364 (+)
G119701 NA other downstream 1377859 6800144 ~ 6860606 (+)

Expression


Co-expression Network