G118935


Basic Information

Item Value
gene id G118935
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 5334127 ~ 5334340 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU135080
CTTTGCCAAGGAAAATCATTTTCAAACAGTTGGAGCAAGCAATTTCATTCAAACAAATCATGTTTTGTTGAACCAACTTAATAGATTTAATTTCTTGTGTTAGATAATATATAGCAAAAAGCTTGTTAGCATGCTAAAGACAATTATGTTTTTTATTATTATAATATACGGGATAGGCAAGTTAGAAGAGACTAGTCTTAATACTGACATGAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135080 True 214 lncRNA 0.29 1 5334127 5334340

Neighbor

gene id symbol gene type direction distance location
CI01000021_05302737_05307812 NA coding upstream 25454 5302343 ~ 5308673 (+)
CI01000021_05244908_05282588 NTSR1 coding upstream 51200 5244731 ~ 5282927 (+)
CI01000021_05193252_05204766 SLCO4A1 coding upstream 129014 5192783 ~ 5205113 (+)
CI01000021_05050240_05098803 NA coding upstream 234328 5048920 ~ 5102550 (+)
CI01000021_04886787_04893309 PLAGL2 coding upstream 440653 4886337 ~ 4893474 (+)
CI01000021_05392788_05403219 NA coding downstream 57962 5392302 ~ 5404100 (+)
CI01000021_05451019_05481032 NA coding downstream 116679 5451019 ~ 5481196 (+)
CI01000021_05524969_05530651 LSM14B coding downstream 190476 5524816 ~ 5531032 (+)
CI01000021_05542885_05545016 NA coding downstream 207017 5541357 ~ 5545596 (+)
CI01000021_05556724_05561020 SS18L1 coding downstream 222384 5556724 ~ 5561020 (+)
G118916 NA non-coding upstream 13855 5318757 ~ 5320272 (+)
G118905 NA non-coding upstream 27879 5305954 ~ 5306248 (+)
G118891 NA non-coding upstream 45380 5288497 ~ 5288747 (+)
G118807 NA non-coding upstream 168780 5161087 ~ 5165347 (+)
G118798 NA non-coding upstream 180605 5153180 ~ 5153522 (+)
G118945 NA non-coding downstream 4785 5339125 ~ 5339363 (+)
G118950 NA non-coding downstream 6274 5340614 ~ 5340830 (+)
G119022 NA non-coding downstream 87717 5422057 ~ 5422285 (+)
G119024 NA non-coding downstream 91414 5425754 ~ 5426081 (+)
G119042 NA non-coding downstream 180866 5515206 ~ 5515433 (+)
G117493 NA other upstream 1298451 4033000 ~ 4035676 (+)
G117484 NA other upstream 1376375 3956146 ~ 3957752 (+)
G117202 NA other upstream 2005894 3269144 ~ 3328233 (+)
G117237 NA other upstream 2090763 3237854 ~ 3243364 (+)
G119701 NA other downstream 1465804 6800144 ~ 6860606 (+)

Expression


Co-expression Network