G118916


Basic Information

Item Value
gene id G118916
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 5318757 ~ 5320272 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU135060
CAAGTTTGAGCGCGGAATCTTGGGACATGTGGTCTTCACCTCAATGGACGGTGAAAAAGAATAGGGATAGGACTCGGGAAGAAATCATGTTCATGGATGCGATTATTAACGTTATTGTAGTATGTAGCGGAGCAGGACCGAGTGTTGTGGGAGCTGAACGAAGCCGCTGGAGTGATTGCACAACACACGCCTCACGAGCGGCAGAACTTTTATTATGTCACAGTCGCCGGTGCCGCTTCCGCTTTTCCGGTCATGAGTATGAGGTAACGCAGCTCTGTTTATCATATTAGATACATTTGAGAGTGTTGAAAATGATGTTATAACGTTACTCTGTGCGTTCGCTTGGCGGCTGCTGTGAGACACTTGTTTGAGATACTGCAGTAAGCTAGATCGATCATATTAAATGCTGGATGGCTTGTGTTGATAAATGGCATGCAATTCATTTTAAAACGTATTGTATGATGGAGAAAATTCTGTATTACTGTTACTAAAAATAAAGCTGCATCTAATTATGCTATGTTAGCTACTTGACAAAATAGTGTTTTTCTCTGAAGCATGATACTCGCAAAAAATCAAGAAAATTAGATTTAAACAATAAGACTAAACGTGTTGAGCTATATAACAACAATTAGTTTTCTGTCTATAAATATATATCAAAACAGTTGTTGCCTTGTCTATTAAAAAGTGTAATATATTAAAGCGTCTTTGGTGTTTCCATGGTTTCTACAAAATAAAACCGGAAACCAAGGCAGACTGAGGGTAACGCGGGTATGACGCAATTGACAGGTGACTCCTCACATTTAAGTGTAAAATACTTAAGTCATAAAATACAAGAAAGGTAATGTTTGGATTAGGGCTGTCAACGTTAACGTGTTAACGCATGCGATTAATTCAAAATCCTTAACGCGTTAAAATAATTTAACGCATATTTAACGCAAAAACGTGAAATTGTGTCATAACGTAATTTACGTGACGCAGTTAGATGATCTTAAAGTCCATGCTGATTATATCAGAGATGGCAGAGAGAATTATTCATTCCAGTGTCTGTTTCGCTTTAAAACACGAACTCTCTGTCATATTGTGTCATTGTATCTGAAGAGCGCGAGCCCTCCCGCATCGCGCTGTTCCTGTCTGAACGGAACGTCGAAACATCCCACCGCTGTATGGCCAGATGATATGAAAACTATGTTTCTCGGCTGGATAAAGCAAATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135060 True 1213 lncRNA 0.39 2 5318757 5320272

Neighbor

gene id symbol gene type direction distance location
CI01000021_05302737_05307812 NA coding upstream 10084 5302343 ~ 5308673 (+)
CI01000021_05244908_05282588 NTSR1 coding upstream 35830 5244731 ~ 5282927 (+)
CI01000021_05193252_05204766 SLCO4A1 coding upstream 113644 5192783 ~ 5205113 (+)
CI01000021_05050240_05098803 NA coding upstream 218958 5048920 ~ 5102550 (+)
CI01000021_04886787_04893309 PLAGL2 coding upstream 425283 4886337 ~ 4893474 (+)
CI01000021_05392788_05403219 NA coding downstream 72030 5392302 ~ 5404100 (+)
CI01000021_05451019_05481032 NA coding downstream 130747 5451019 ~ 5481196 (+)
CI01000021_05524969_05530651 LSM14B coding downstream 204544 5524816 ~ 5531032 (+)
CI01000021_05542885_05545016 NA coding downstream 221085 5541357 ~ 5545596 (+)
CI01000021_05556724_05561020 SS18L1 coding downstream 236452 5556724 ~ 5561020 (+)
G118905 NA non-coding upstream 12509 5305954 ~ 5306248 (+)
G118891 NA non-coding upstream 30010 5288497 ~ 5288747 (+)
G118807 NA non-coding upstream 153410 5161087 ~ 5165347 (+)
G118798 NA non-coding upstream 165235 5153180 ~ 5153522 (+)
G118793 NA non-coding upstream 169072 5149334 ~ 5149685 (+)
G118935 NA non-coding downstream 13855 5334127 ~ 5334340 (+)
G118945 NA non-coding downstream 18853 5339125 ~ 5339363 (+)
G118950 NA non-coding downstream 20342 5340614 ~ 5340830 (+)
G119022 NA non-coding downstream 101785 5422057 ~ 5422285 (+)
G119024 NA non-coding downstream 105482 5425754 ~ 5426081 (+)
G117493 NA other upstream 1283081 4033000 ~ 4035676 (+)
G117484 NA other upstream 1361005 3956146 ~ 3957752 (+)
G117202 NA other upstream 1990524 3269144 ~ 3328233 (+)
G117237 NA other upstream 2075393 3237854 ~ 3243364 (+)
G119701 NA other downstream 1479872 6800144 ~ 6860606 (+)

Expression


Co-expression Network