G118950


Basic Information

Item Value
gene id G118950
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 5340614 ~ 5340830 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU135095
AAGCATTTCCCAAGCAAACATTCAGCCTATCAGCTATATAATAAACTTTCATCTTATCCTTTAACTTGGTTAACCGTTTCCCGATTTACATTTTTAACTTTGCACATTTTTTTAAAATGGCCTAATTTTAAATACCTTTCTGAGTGATCTGTATTTCAACATCTGTAGCATAGTTTGTTCAACTTAGTGCATTCTGCTTGTTTTCCCTTGACATTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135095 True 217 lncRNA 0.32 1 5340614 5340830

Neighbor

gene id symbol gene type direction distance location
CI01000021_05302737_05307812 NA coding upstream 31941 5302343 ~ 5308673 (+)
CI01000021_05244908_05282588 NTSR1 coding upstream 57687 5244731 ~ 5282927 (+)
CI01000021_05193252_05204766 SLCO4A1 coding upstream 135501 5192783 ~ 5205113 (+)
CI01000021_05050240_05098803 NA coding upstream 240815 5048920 ~ 5102550 (+)
CI01000021_04886787_04893309 PLAGL2 coding upstream 447140 4886337 ~ 4893474 (+)
CI01000021_05392788_05403219 NA coding downstream 51472 5392302 ~ 5404100 (+)
CI01000021_05451019_05481032 NA coding downstream 110189 5451019 ~ 5481196 (+)
CI01000021_05524969_05530651 LSM14B coding downstream 183986 5524816 ~ 5531032 (+)
CI01000021_05542885_05545016 NA coding downstream 200527 5541357 ~ 5545596 (+)
CI01000021_05556724_05561020 SS18L1 coding downstream 215894 5556724 ~ 5561020 (+)
G118945 NA non-coding upstream 1251 5339125 ~ 5339363 (+)
G118935 NA non-coding upstream 6274 5334127 ~ 5334340 (+)
G118916 NA non-coding upstream 20342 5318757 ~ 5320272 (+)
G118905 NA non-coding upstream 34366 5305954 ~ 5306248 (+)
G118891 NA non-coding upstream 51867 5288497 ~ 5288747 (+)
G119022 NA non-coding downstream 81227 5422057 ~ 5422285 (+)
G119024 NA non-coding downstream 84924 5425754 ~ 5426081 (+)
G119042 NA non-coding downstream 174376 5515206 ~ 5515433 (+)
G119043 NA non-coding downstream 175678 5516508 ~ 5516810 (+)
G118974 NA non-coding downstream 176549 5517379 ~ 5518443 (+)
G117493 NA other upstream 1304938 4033000 ~ 4035676 (+)
G117484 NA other upstream 1382862 3956146 ~ 3957752 (+)
G117202 NA other upstream 2012381 3269144 ~ 3328233 (+)
G117237 NA other upstream 2097250 3237854 ~ 3243364 (+)
G119701 NA other downstream 1459314 6800144 ~ 6860606 (+)

Expression


Co-expression Network