G119049


Basic Information

Item Value
gene id G119049
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 5580170 ~ 5580441 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU135209
ATTTATCATCAAGAACTCAATCAATGAACCAATGATCTGAAATCAGACCTTCAGAAAGCAGACGTCAGTGGCTTTCATCATCTCCTCCATGTCTTTGATTGTGTGTGAAAGAGCTGAGATGTGTCTGTTCATCTCCTCCAGCTTCTCCTTCATCATCTGCTTCTTCTGCTCCTCTTCCTCCCTCAGTGCAGTGATTGCAGCTTCTTCTTCATCTCTGAGAAATTGATGAAGCTTCTCAAACTGCTGTTTAATCTGATGCTCTGTGTGCTCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135209 True 272 lncRNA 0.43 1 5580170 5580441

Neighbor

gene id symbol gene type direction distance location
CI01000021_05556724_05561020 SS18L1 coding upstream 19150 5556724 ~ 5561020 (+)
CI01000021_05542885_05545016 NA coding upstream 34574 5541357 ~ 5545596 (+)
CI01000021_05524969_05530651 LSM14B coding upstream 49138 5524816 ~ 5531032 (+)
CI01000021_05451019_05481032 NA coding upstream 98974 5451019 ~ 5481196 (+)
CI01000021_05392788_05403219 NA coding upstream 176070 5392302 ~ 5404100 (+)
CI01000021_05607950_05611874 OGFR coding downstream 27509 5607950 ~ 5612560 (+)
CI01000021_05632833_05637281 COL9A3 coding downstream 52392 5632833 ~ 5637566 (+)
CI01000021_05700274_05719435 NA coding downstream 119833 5700274 ~ 5720762 (+)
CI01000021_05748401_05769219 NA coding downstream 167653 5748094 ~ 5769219 (+)
CI01000021_05786615_05790109 NA coding downstream 206174 5786615 ~ 5790938 (+)
G118984 NA non-coding upstream 13063 5562205 ~ 5567107 (+)
G118995 NA non-coding upstream 61241 5518621 ~ 5518929 (+)
G118974 NA non-coding upstream 61727 5517379 ~ 5518443 (+)
G119043 NA non-coding upstream 63360 5516508 ~ 5516810 (+)
G119042 NA non-coding upstream 64737 5515206 ~ 5515433 (+)
G119072 NA non-coding downstream 99958 5680399 ~ 5680682 (+)
G119073 NA non-coding downstream 101162 5681603 ~ 5681820 (+)
G118964 NA non-coding downstream 202140 5782581 ~ 5785677 (+)
G119001 NA non-coding downstream 214415 5794856 ~ 5795722 (+)
G118958 NA non-coding downstream 216188 5796629 ~ 5801397 (+)
CI01000021_04886787_04893309 PLAGL2 other upstream 690662 4886337 ~ 4893474 (+)
G117493 NA other upstream 1544494 4033000 ~ 4035676 (+)
G117484 NA other upstream 1622418 3956146 ~ 3957752 (+)
G117202 NA other upstream 2251937 3269144 ~ 3328233 (+)
G117237 NA other upstream 2336806 3237854 ~ 3243364 (+)
G119701 NA other downstream 1219703 6800144 ~ 6860606 (+)

Expression


Co-expression Network