RNA id: TU266878


Basic Information

Item Value
RNA id TU266878
length 206
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G235298
representative True

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 9400361 ~ 9400566 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GCGAGTTTGAGTCGCTTATAATGTACATTTGAAAAAGCAACACGTGTCAAACATCTTTCCAGACATGAGAAGCATTTATTAACGTCTTGTCCAACAAAAGACAACATTTAATAACATGTTTTTACTCCAAACTCACTTCATAACGACAGTTGAGCATCTTTCTGTGAGATGATGTGGCTTCTTACACAGAATAAGGCAGTCGTGTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU266822 lncRNA downstream 83563 9316532 ~ 9316798 (-) True G235250
TU266816 lncRNA downstream 97657 9302438 ~ 9302704 (-) True G235244
TU266811 lncRNA downstream 106969 9292830 ~ 9293392 (-) True G235239
TU266803 lncRNA downstream 123003 9277139 ~ 9277358 (-) True G235231
TU266796 lncRNA downstream 138558 9261593 ~ 9261803 (-) True G235224
TU266891 lncRNA upstream 36903 9437469 ~ 9441851 (-) True G235308
TU266934 lncRNA upstream 126282 9526848 ~ 9527267 (-) True G235350
TU266952 lncRNA upstream 156198 9556764 ~ 9559903 (-) True G235368
TU267183 lncRNA upstream 176028 9576594 ~ 9576876 (-) True G235575
TU267193 lncRNA upstream 181856 9582422 ~ 9664231 (-) True G235582
CI01000054_09218869_09223868.mRNA mRNA downstream 176242 9218632 ~ 9224119 (-) False CI01000054_09218869_09223868
CI01000054_09077309_09080163.mRNA mRNA downstream 319549 9076831 ~ 9080812 (-) True CI01000054_09077309_09080163
CI01000054_08953766_08966617.mRNA mRNA downstream 433744 8952134 ~ 8966617 (-) True CI01000054_08953766_08966617
CI01000054_08937312_08942587.mRNA mRNA downstream 457774 8937312 ~ 8942587 (-) True CI01000054_08937312_08942587
CI01000054_08721571_08723333.mRNA mRNA downstream 676279 8721008 ~ 8724082 (-) False CI01000054_08721571_08723333
CI01000054_09453616_09482480.mRNA mRNA upstream 51543 9452109 ~ 9482723 (-) True CI01000054_09453616_09482480
CI01000054_09483912_09484282.mRNA mRNA upstream 83246 9483812 ~ 9484282 (-) False CI01000054_09483912_09484282
CI01000054_09488559_09488870.mRNA mRNA upstream 87710 9488276 ~ 9488870 (-) True CI01000054_09488559_09488870
CI01000054_09495785_09497239.mRNA mRNA upstream 94884 9495450 ~ 9497682 (-) True CI01000054_09495785_09497239
CI01000054_09531778_09544007.mRNA mRNA upstream 130944 9531510 ~ 9544510 (-) True CI01000054_09531778_09544007
TU266788 other downstream 151823 9248039 ~ 9248538 (-) True G235216
TU265381 other downstream 2228688 7171325 ~ 7171673 (-) True G233891
TU265088 other downstream 2746348 6649149 ~ 6654013 (-) True G233619
TU263564 other downstream 4191121 5206199 ~ 5209240 (-) True G232274
TU263225 other downstream 4728128 4672197 ~ 4672233 (-) True G231958
TU266868 other upstream 82581 9485215 ~ 9485318 (-) False G235290
TU266867 other upstream 82786 9485215 ~ 9485318 (-) False G235290
TU266866 other upstream 82884 9485215 ~ 9485318 (-) False G235290
TU266865 other upstream 82918 9485215 ~ 9485318 (-) False G235290
TU266869 other upstream 82918 9485215 ~ 9485387 (-) True G235290

Expression Profile