RNA id: TU373327


Basic Information

Item Value
RNA id TU373327
length 216
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G328454
representative True

Chromosome Information

Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 1226846 ~ 1227061 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GAGTTTTTGCTGAAGGGCATGTCCGTGGCGGCCTGACAAAGTCTGATGTTTCGCAATGAAAGAGAAAGCTGTTGTAACTCAGGCATACAATGTCCAATCTGCCCCAAACTTCACATGTTTGATAAGAGTCCTGGCTTGAAGACATGCCAATATTCAGTTAGTCATAGTGCCACCTGCTGGCAACAGGAAATGGCATGGTTTACAATATATTTCACT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU373228 lncRNA downstream 65325 1158493 ~ 1161521 (-) True G328367
TU373235 lncRNA downstream 68505 1154767 ~ 1158341 (-) True G328374
TU373231 lncRNA downstream 129574 1040046 ~ 1097272 (-) True G328370
TU373238 lncRNA downstream 148570 1023486 ~ 1078276 (-) True G328377
TU373211 lncRNA downstream 231399 995182 ~ 995447 (-) True G328350
TU373332 lncRNA upstream 5065 1232126 ~ 1233118 (-) True G328457
TU373527 lncRNA upstream 49872 1276933 ~ 1277185 (-) True G328640
TU373530 lncRNA upstream 60564 1287625 ~ 1287855 (-) True G328643
TU373537 lncRNA upstream 72286 1299347 ~ 1299650 (-) True G328650
TU373541 lncRNA upstream 78386 1305447 ~ 1305725 (-) True G328654
CI01000112_01120464_01124295.mRNA mRNA downstream 102551 1120087 ~ 1124295 (-) True CI01000112_01120464_01124295
CI01000112_01092142_01094413.mRNA mRNA downstream 132365 1091672 ~ 1094481 (-) True CI01000112_01092142_01094413
CI01000112_01027075_01062602.mRNA mRNA downstream 164244 1027075 ~ 1062602 (-) True CI01000112_01027075_01062602
CI01000112_01010850_01018328.mRNA mRNA downstream 207509 1010689 ~ 1019337 (-) True CI01000112_01010850_01018328
CI01000112_01001591_01002671.mRNA mRNA downstream 224042 1001578 ~ 1002804 (-) True CI01000112_01001591_01002671
CI01000112_01324078_01345821.mRNA mRNA upstream 97017 1324078 ~ 1345821 (-) True CI01000112_01324078_01345821
CI01000112_01367862_01375489.mRNA mRNA upstream 140390 1367451 ~ 1377374 (-) True CI01000112_01367862_01375489
CI01000112_01437714_01440420.mRNA mRNA upstream 210396 1437457 ~ 1440508 (-) True CI01000112_01437714_01440420
CI01000112_01486968_01488917.mRNA mRNA upstream 258310 1485371 ~ 1489501 (-) True CI01000112_01486968_01488917
CI01000112_01517833_01520418.mRNA mRNA upstream 290667 1517728 ~ 1520546 (-) True CI01000112_01517833_01520418
TU373156 other downstream 358210 868518 ~ 868636 (-) True G328308
TU373157 other downstream 431900 794847 ~ 794946 (-) True G328309
TU373185 other downstream 445062 780164 ~ 781784 (-) False G328332
TU373528 other upstream 59031 1286092 ~ 1286524 (-) True G328641
TU373529 other upstream 59594 1286655 ~ 1286958 (-) True G328642
TU374646 other upstream 402715 1629776 ~ 1633322 (-) True G329587
TU374605 other upstream 570955 1798016 ~ 1800658 (-) False G329559
TU374607 other upstream 570955 1798016 ~ 1809739 (-) False G329559

Expression Profile