Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000113_00568754_00569821.mRNA |
| length | 2107 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 1 |
| gene id | CI01000113_00568754_00569821 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000113 |
| NCBI id | null |
| chromosome length | 2886875 |
| location | 568410 ~ 570516 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0007492 | endoderm development | biological_process |
| id | description |
|---|---|
| K04292 | S1PR2, EDG5; sphingosine 1-phosphate receptor 2 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU376659 | lncRNA | upstream | 33129 | 534943 ~ 535281 (+) | True | G331360 |
| TU376658 | lncRNA | upstream | 34097 | 534077 ~ 534313 (+) | True | G331359 |
| TU376657 | lncRNA | upstream | 39478 | 528686 ~ 528932 (+) | True | G331358 |
| TU376653 | lncRNA | upstream | 50256 | 517802 ~ 518154 (+) | True | G331354 |
| TU376652 | lncRNA | upstream | 50653 | 517286 ~ 517757 (+) | True | G331353 |
| TU376691 | lncRNA | downstream | 133997 | 704513 ~ 704739 (+) | True | G331391 |
| TU376697 | lncRNA | downstream | 143930 | 714446 ~ 714897 (+) | True | G331397 |
| TU376705 | lncRNA | downstream | 153271 | 723787 ~ 724001 (+) | True | G331405 |
| TU376706 | lncRNA | downstream | 154943 | 725459 ~ 725690 (+) | True | G331406 |
| TU376720 | lncRNA | downstream | 199778 | 770294 ~ 776185 (+) | True | G331413 |
| CI01000113_00524568_00527858.mRNA | mRNA | upstream | 40112 | 523876 ~ 528298 (+) | True | CI01000113_00524568_00527858 |
| CI01000113_00455243_00457236.mRNA | mRNA | upstream | 109716 | 454875 ~ 458694 (+) | True | CI01000113_00455243_00457236 |
| CI01000113_00428584_00446187.mRNA | mRNA | upstream | 121766 | 428260 ~ 446644 (+) | True | CI01000113_00428584_00446187 |
| CI01000113_00370404_00370736.mRNA | mRNA | upstream | 195426 | 370404 ~ 372984 (+) | False | CI01000113_00370404_00370736 |
| CI01000113_00342143_00354071.mRNA | mRNA | upstream | 214108 | 341732 ~ 354302 (+) | True | CI01000113_00342143_00354071 |
| CI01000113_00574016_00587822.mRNA | mRNA | downstream | 2939 | 573455 ~ 588082 (+) | True | CI01000113_00574016_00587822 |
| CI01000113_00629848_00638123.mRNA | mRNA | downstream | 58327 | 628843 ~ 638432 (+) | True | CI01000113_00629848_00638123 |
| CI01000113_00645261_00649236.mRNA | mRNA | downstream | 74745 | 645261 ~ 649815 (+) | True | CI01000113_00645261_00649236 |
| CI01000113_00659612_00684227.mRNA | mRNA | downstream | 89096 | 659612 ~ 685030 (+) | True | CI01000113_00659612_00684227 |
| CI01000113_00997825_01005290.mRNA | mRNA | downstream | 426347 | 996863 ~ 1005399 (+) | True | CI01000113_00997825_01005290 |
| TU376556 | other | upstream | 233789 | 334158 ~ 334621 (+) | True | G331260 |
| TU376780 | other | downstream | 342876 | 913392 ~ 916537 (+) | True | G331470 |
| TU376797 | other | downstream | 347219 | 917735 ~ 922133 (+) | True | G331487 |
| TU376961 | other | downstream | 675775 | 1246291 ~ 1246573 (+) | True | G331615 |
| TU376908 | other | downstream | 854045 | 1424561 ~ 1425441 (+) | True | G331578 |
| TU377162 | other | downstream | 1092269 | 1662785 ~ 1663255 (+) | True | G331767 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00052143 | True | 2370 | mRNA | 0.46 | 2 | NC_007114.7 | 54616015 ~ 54669185 (-) |
