RNA id: TCONS_00018012


Basic Information

Item Value
RNA id TCONS_00018012
length 525
RNA type mRNA
GC content 0.41
exon number 2
gene id XLOC_009154
representative True

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 19678772 ~ 19681870 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATCCACAAAGTCTGGATGATAAGCTTCTTCTATCTTACAGATTTGACAGATTGGGTTTTTATACAGAGGTTTAGGGTGTGAGAGAAAAGATGACAAAGAGGAGCGCAACATGAACCCCTCCGGCGATCTTTCCACTGATAAGGATTCAGATCCGgggtcaccacagatcAATGAACTGCCAATTAGAAGCTTCTTGGACGGTATCCTGAAAATTTTTAGAAGATTCCAGGAATGCTCCCAGAAGACTCTTGAGGTACCCATGATGATCCTAGAAGGTTCCCGGTAGGTACCCAGAAGATTCCCATGCTTCTCAAGAAAGACCCAAAACGTTCCCAGAAGTAACTCGAAGAATTCCTAGAATGTCCCTGAAAGAAGGTTTCCACAAAGTTCTTGGAAGTTATCTGTGCATTCTCAGAAGGTTTTTAGAACAAACCTGAAAGGTTTCCATGGGGTATTTGACATGTTCTCAGAACCTTCTTTGAAGAATCAAAAAACTAGCATCaaatcagtaaataaaaacaaacc

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000152266

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00018008 lncRNA downstream 95757 19581907 ~ 19583015 (-) True XLOC_009152
TCONS_00019142 lncRNA downstream 392172 19285164 ~ 19286600 (-) True XLOC_009147
TCONS_00017982 lncRNA downstream 1509424 18166781 ~ 18169348 (-) True XLOC_009134
TCONS_00017965 lncRNA downstream 1813209 17844191 ~ 17865563 (-) False XLOC_009127
TCONS_00019141 lncRNA downstream 1923846 17751150 ~ 17754926 (-) True XLOC_009125
TCONS_00019143 lncRNA upstream 102621 19784491 ~ 19793611 (-) True XLOC_009157
TCONS_00018021 lncRNA upstream 247625 19929495 ~ 19932848 (-) True XLOC_009158
TCONS_00018023 lncRNA upstream 325105 20006975 ~ 20011629 (-) False XLOC_009159
TCONS_00018024 lncRNA upstream 325123 20006993 ~ 20009686 (-) True XLOC_009159
TCONS_00018026 lncRNA upstream 386755 20068625 ~ 20069243 (-) True XLOC_009160
TCONS_00018009 mRNA downstream 1261 19661498 ~ 19677511 (-) False XLOC_009153
TCONS_00018011 mRNA downstream 9002 19668586 ~ 19669770 (-) True XLOC_009153
TCONS_00018005 mRNA downstream 234775 19353693 ~ 19443997 (-) True XLOC_009149
TCONS_00018004 mRNA downstream 344324 19331159 ~ 19334448 (-) True XLOC_009148
TCONS_00018001 mRNA downstream 428229 19131702 ~ 19250543 (-) False XLOC_009146
TCONS_00018013 mRNA upstream 15376 19697246 ~ 19724932 (-) False XLOC_009155
TCONS_00018014 mRNA upstream 16059 19697929 ~ 19705707 (-) True XLOC_009155
TCONS_00018016 mRNA upstream 44359 19726229 ~ 19771981 (-) False XLOC_009156
TCONS_00018015 mRNA upstream 44359 19726229 ~ 19771981 (-) False XLOC_009156
TCONS_00018020 mRNA upstream 65774 19747644 ~ 19772372 (-) True XLOC_009156
TCONS_00018010 other downstream 3949 19662101 ~ 19674823 (-) False XLOC_009153
TCONS_00018007 other downstream 135838 19542820 ~ 19542934 (-) True XLOC_009151
TCONS_00018006 other downstream 321383 19357270 ~ 19357389 (-) True XLOC_009150
TCONS_00018003 other downstream 540259 19135979 ~ 19138513 (-) True XLOC_009146
TCONS_00018000 other downstream 583665 19094511 ~ 19095107 (-) True XLOC_009145
TCONS_00018017 other upstream 46123 19727993 ~ 19728619 (-) False XLOC_009156
TCONS_00018018 other upstream 63821 19745691 ~ 19747714 (-) False XLOC_009156
TCONS_00018019 other upstream 63861 19745731 ~ 19752974 (-) False XLOC_009156
TCONS_00018045 other upstream 1097542 20779412 ~ 20781116 (-) True XLOC_009171
TCONS_00018046 other upstream 1116258 20798128 ~ 20799830 (-) True XLOC_009172