Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00018010 |
| length | 734 |
| RNA type | processed_transcript |
| GC content | 0.46 |
| exon number | 3 |
| gene id | XLOC_009153 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007126.7 |
| NCBI id | CM002899.2 |
| chromosome length | 48040578 |
| location | 19661498 ~ 19677511 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006986 | response to unfolded protein | biological_process |
| GO:0016192 | vesicle-mediated transport | biological_process |
| GO:0034620 | cellular response to unfolded protein | biological_process |
| GO:0051085 | chaperone cofactor-dependent protein refolding | biological_process |
| GO:0042026 | protein refolding | biological_process |
| GO:0005829 | cytosol | cellular_component |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0044183 | protein folding chaperone | molecular_function |
| GO:0051787 | misfolded protein binding | molecular_function |
| GO:0031072 | heat shock protein binding | molecular_function |
| GO:0000166 | nucleotide binding | molecular_function |
| GO:0016887 | ATPase activity | molecular_function |
| GO:0051082 | unfolded protein binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-121214-31 | Predicted to enable several functions, including ATP binding activity; ATP hydrolysis activity; and misfolded protein binding activity. Predicted to be involved in several processes, including cellular response to unfolded protein; chaperone cofactor-dependent protein refolding; and protein refolding. Predicted to be active in cytosol; nucleus; and plasma membrane. Is expressed in somite. Human ortholog(s) of this gene implicated in Parkinson's disease and renal hypertension. Orthologous to human HSPA8 (heat shock protein family A (Hsp70) member 8). |
| ensembl_id | ENSDART00000152740 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00018008 | lncRNA | downstream | 79086 | 19581907 ~ 19583015 (-) | True | XLOC_009152 |
| TCONS_00019142 | lncRNA | downstream | 375501 | 19285164 ~ 19286600 (-) | True | XLOC_009147 |
| TCONS_00017982 | lncRNA | downstream | 1492753 | 18166781 ~ 18169348 (-) | True | XLOC_009134 |
| TCONS_00017965 | lncRNA | downstream | 1796538 | 17844191 ~ 17865563 (-) | False | XLOC_009127 |
| TCONS_00019141 | lncRNA | downstream | 1907175 | 17751150 ~ 17754926 (-) | True | XLOC_009125 |
| TCONS_00019143 | lncRNA | upstream | 109668 | 19784491 ~ 19793611 (-) | True | XLOC_009157 |
| TCONS_00018021 | lncRNA | upstream | 254672 | 19929495 ~ 19932848 (-) | True | XLOC_009158 |
| TCONS_00018023 | lncRNA | upstream | 332152 | 20006975 ~ 20011629 (-) | False | XLOC_009159 |
| TCONS_00018024 | lncRNA | upstream | 332170 | 20006993 ~ 20009686 (-) | True | XLOC_009159 |
| TCONS_00018026 | lncRNA | upstream | 393802 | 20068625 ~ 20069243 (-) | True | XLOC_009160 |
| TCONS_00018005 | mRNA | downstream | 218104 | 19353693 ~ 19443997 (-) | True | XLOC_009149 |
| TCONS_00018004 | mRNA | downstream | 327653 | 19331159 ~ 19334448 (-) | True | XLOC_009148 |
| TCONS_00018001 | mRNA | downstream | 411558 | 19131702 ~ 19250543 (-) | False | XLOC_009146 |
| TCONS_00018002 | mRNA | downstream | 411558 | 19131849 ~ 19250543 (-) | False | XLOC_009146 |
| TCONS_00017999 | mRNA | downstream | 610949 | 19050834 ~ 19051152 (-) | True | XLOC_009144 |
| TCONS_00018012 | mRNA | upstream | 3949 | 19678772 ~ 19681870 (-) | True | XLOC_009154 |
| TCONS_00018013 | mRNA | upstream | 22423 | 19697246 ~ 19724932 (-) | False | XLOC_009155 |
| TCONS_00018014 | mRNA | upstream | 23106 | 19697929 ~ 19705707 (-) | True | XLOC_009155 |
| TCONS_00018016 | mRNA | upstream | 51406 | 19726229 ~ 19771981 (-) | False | XLOC_009156 |
| TCONS_00018015 | mRNA | upstream | 51406 | 19726229 ~ 19771981 (-) | False | XLOC_009156 |
| TCONS_00018007 | other | downstream | 119167 | 19542820 ~ 19542934 (-) | True | XLOC_009151 |
| TCONS_00018006 | other | downstream | 304712 | 19357270 ~ 19357389 (-) | True | XLOC_009150 |
| TCONS_00018003 | other | downstream | 523588 | 19135979 ~ 19138513 (-) | True | XLOC_009146 |
| TCONS_00018000 | other | downstream | 566994 | 19094511 ~ 19095107 (-) | True | XLOC_009145 |
| TCONS_00017983 | other | downstream | 1481277 | 18177941 ~ 18180824 (-) | True | XLOC_009135 |
| TCONS_00018017 | other | upstream | 53170 | 19727993 ~ 19728619 (-) | False | XLOC_009156 |
| TCONS_00018018 | other | upstream | 70868 | 19745691 ~ 19747714 (-) | False | XLOC_009156 |
| TCONS_00018019 | other | upstream | 70908 | 19745731 ~ 19752974 (-) | False | XLOC_009156 |
| TCONS_00018045 | other | upstream | 1104589 | 20779412 ~ 20781116 (-) | True | XLOC_009171 |
| TCONS_00018046 | other | upstream | 1123305 | 20798128 ~ 20799830 (-) | True | XLOC_009172 |
