RNA id: TCONS_00018007


Basic Information

Item Value
RNA id TCONS_00018007
length 115
RNA type rRNA
GC content 0.50
exon number 1
gene id XLOC_009151
representative True

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 19542820 ~ 19542934 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GCTGGCAGCTAACTCTGCAACTCACTTACATGATCACTTACTAAAGCTAACCAGGGTTGCGTCGGGTCAGTACCTtgatgggaaaccacatgggaaagctaggttgctgctggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000192084

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00019142 lncRNA downstream 256220 19285164 ~ 19286600 (-) True XLOC_009147
TCONS_00017982 lncRNA downstream 1373472 18166781 ~ 18169348 (-) True XLOC_009134
TCONS_00017965 lncRNA downstream 1677257 17844191 ~ 17865563 (-) False XLOC_009127
TCONS_00019141 lncRNA downstream 1787894 17751150 ~ 17754926 (-) True XLOC_009125
TCONS_00017963 lncRNA downstream 1787953 17751150 ~ 17754867 (-) False XLOC_009125
TCONS_00018008 lncRNA upstream 38973 19581907 ~ 19583015 (-) True XLOC_009152
TCONS_00019143 lncRNA upstream 241557 19784491 ~ 19793611 (-) True XLOC_009157
TCONS_00018021 lncRNA upstream 386561 19929495 ~ 19932848 (-) True XLOC_009158
TCONS_00018023 lncRNA upstream 464041 20006975 ~ 20011629 (-) False XLOC_009159
TCONS_00018024 lncRNA upstream 464059 20006993 ~ 20009686 (-) True XLOC_009159
TCONS_00018005 mRNA downstream 98823 19353693 ~ 19443997 (-) True XLOC_009149
TCONS_00018004 mRNA downstream 208372 19331159 ~ 19334448 (-) True XLOC_009148
TCONS_00018001 mRNA downstream 292277 19131702 ~ 19250543 (-) False XLOC_009146
TCONS_00018002 mRNA downstream 292277 19131849 ~ 19250543 (-) False XLOC_009146
TCONS_00017998 mRNA downstream 414115 19036377 ~ 19128705 (-) False XLOC_009144
TCONS_00018009 mRNA upstream 118564 19661498 ~ 19677511 (-) False XLOC_009153
TCONS_00018011 mRNA upstream 125652 19668586 ~ 19669770 (-) True XLOC_009153
TCONS_00018012 mRNA upstream 135838 19678772 ~ 19681870 (-) True XLOC_009154
TCONS_00018013 mRNA upstream 154312 19697246 ~ 19724932 (-) False XLOC_009155
TCONS_00018014 mRNA upstream 154995 19697929 ~ 19705707 (-) True XLOC_009155
TCONS_00018006 other downstream 185431 19357270 ~ 19357389 (-) True XLOC_009150
TCONS_00018003 other downstream 404307 19135979 ~ 19138513 (-) True XLOC_009146
TCONS_00018000 other downstream 447713 19094511 ~ 19095107 (-) True XLOC_009145
TCONS_00017983 other downstream 1361996 18177941 ~ 18180824 (-) True XLOC_009135
TCONS_00017978 other downstream 1391040 18151665 ~ 18151780 (-) True XLOC_009132
TCONS_00018010 other upstream 119167 19662101 ~ 19674823 (-) False XLOC_009153
TCONS_00018017 other upstream 185059 19727993 ~ 19728619 (-) False XLOC_009156
TCONS_00018018 other upstream 202757 19745691 ~ 19747714 (-) False XLOC_009156
TCONS_00018019 other upstream 202797 19745731 ~ 19752974 (-) False XLOC_009156
TCONS_00018045 other upstream 1236478 20779412 ~ 20781116 (-) True XLOC_009171