RNA id: TCONS_00018006


Basic Information

Item Value
RNA id TCONS_00018006
length 120
RNA type rRNA
GC content 0.51
exon number 1
gene id XLOC_009150
representative True

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 19357270 ~ 19357389 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ACTTACATGccacatcaccctgcagcccaagactggttactcccTGAATCTAAGTatagggctgagcctggtcagtacctggatgggaggccacatgggaaaagtagattgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000120598

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00019142 lncRNA downstream 70670 19285164 ~ 19286600 (-) True XLOC_009147
TCONS_00017982 lncRNA downstream 1187922 18166781 ~ 18169348 (-) True XLOC_009134
TCONS_00017965 lncRNA downstream 1491707 17844191 ~ 17865563 (-) False XLOC_009127
TCONS_00019141 lncRNA downstream 1602344 17751150 ~ 17754926 (-) True XLOC_009125
TCONS_00017963 lncRNA downstream 1602403 17751150 ~ 17754867 (-) False XLOC_009125
TCONS_00018008 lncRNA upstream 224518 19581907 ~ 19583015 (-) True XLOC_009152
TCONS_00019143 lncRNA upstream 427102 19784491 ~ 19793611 (-) True XLOC_009157
TCONS_00018021 lncRNA upstream 572106 19929495 ~ 19932848 (-) True XLOC_009158
TCONS_00018023 lncRNA upstream 649586 20006975 ~ 20011629 (-) False XLOC_009159
TCONS_00018024 lncRNA upstream 649604 20006993 ~ 20009686 (-) True XLOC_009159
TCONS_00018004 mRNA downstream 22822 19331159 ~ 19334448 (-) True XLOC_009148
TCONS_00018001 mRNA downstream 106727 19131702 ~ 19250543 (-) False XLOC_009146
TCONS_00018002 mRNA downstream 106727 19131849 ~ 19250543 (-) False XLOC_009146
TCONS_00017998 mRNA downstream 228565 19036377 ~ 19128705 (-) False XLOC_009144
TCONS_00017999 mRNA downstream 306118 19050834 ~ 19051152 (-) True XLOC_009144
TCONS_00018009 mRNA upstream 304109 19661498 ~ 19677511 (-) False XLOC_009153
TCONS_00018011 mRNA upstream 311197 19668586 ~ 19669770 (-) True XLOC_009153
TCONS_00018012 mRNA upstream 321383 19678772 ~ 19681870 (-) True XLOC_009154
TCONS_00018013 mRNA upstream 339857 19697246 ~ 19724932 (-) False XLOC_009155
TCONS_00018014 mRNA upstream 340540 19697929 ~ 19705707 (-) True XLOC_009155
TCONS_00018003 other downstream 218757 19135979 ~ 19138513 (-) True XLOC_009146
TCONS_00018000 other downstream 262163 19094511 ~ 19095107 (-) True XLOC_009145
TCONS_00017983 other downstream 1176446 18177941 ~ 18180824 (-) True XLOC_009135
TCONS_00017978 other downstream 1205490 18151665 ~ 18151780 (-) True XLOC_009132
TCONS_00017973 other downstream 1334161 18020545 ~ 18023109 (-) True XLOC_009128
TCONS_00018007 other upstream 185431 19542820 ~ 19542934 (-) True XLOC_009151
TCONS_00018010 other upstream 304712 19662101 ~ 19674823 (-) False XLOC_009153
TCONS_00018017 other upstream 370604 19727993 ~ 19728619 (-) False XLOC_009156
TCONS_00018018 other upstream 388302 19745691 ~ 19747714 (-) False XLOC_009156
TCONS_00018019 other upstream 388342 19745731 ~ 19752974 (-) False XLOC_009156