RNA id: TU489913


Basic Information

Item Value
RNA id TU489913
length 262
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G426683
representative True

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 14414370 ~ 14414631 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TTTTAGGACTTCCGGTTCCATCGCCCCGAAGTCAATGGGTTTTTTTAATGGGTTTTTGCTAAATCGCCTGAAATAAGGTCTGTGGTTAACAAAGCCTCTAAATATTTTCACGTTTTGATCTATGACATAAAACACACCAGTTATAACCCGCTTGTGATTTTTTAAACCTTTATTGTGTCTTAAAAATGGCGGTTGCTAACAAATTGCTAAAAGGGACTACTTCCTTTGGTGGGGACTTTAGACGTCATCATGACAAACAGGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU489912 lncRNA upstream 1275 14412895 ~ 14413095 (+) True G426682
TU489910 lncRNA upstream 10626 14403527 ~ 14403744 (+) True G426680
TU489909 lncRNA upstream 12812 14401294 ~ 14401558 (+) True G426679
TU489908 lncRNA upstream 13416 14400544 ~ 14400954 (+) True G426678
TU489906 lncRNA upstream 15460 14398549 ~ 14398910 (+) True G426676
TU489879 lncRNA downstream 4484 14419115 ~ 14531423 (+) True G426649
TU489874 lncRNA downstream 19596 14434227 ~ 14438998 (+) True G426644
TU489954 lncRNA downstream 342453 14757084 ~ 14757737 (+) True G426723
TU489971 lncRNA downstream 420695 14835326 ~ 14841734 (+) True G426740
TU490009 lncRNA downstream 427178 14841809 ~ 14842084 (+) True G426776
CI01000304_14356867_14373980.mRNA mRNA upstream 39704 14356586 ~ 14374666 (+) True CI01000304_14356867_14373980
CI01000304_14352375_14355516.mRNA mRNA upstream 58854 14352375 ~ 14355516 (+) True CI01000304_14352375_14355516
CI01000304_14331169_14331855.mRNA mRNA upstream 82397 14331064 ~ 14331973 (+) True CI01000304_14331169_14331855
CI01000304_14304022_14317252.mRNA mRNA upstream 96345 14304022 ~ 14318025 (+) False CI01000304_14304022_14317252
CI01000304_14231227_14261460.mRNA mRNA upstream 152207 14231073 ~ 14262163 (+) True CI01000304_14231227_14261460
CI01000304_14695603_14740389.mRNA mRNA downstream 280972 14695603 ~ 14741079 (+) True CI01000304_14695603_14740389
CI01000304_15034188_15038152.mRNA mRNA downstream 617586 15032217 ~ 15038498 (+) False CI01000304_15034188_15038152
CI01000304_15040739_15045239.mRNA mRNA downstream 625921 15040552 ~ 15045257 (+) True CI01000304_15040739_15045239
CI01000304_15047768_15063987.mRNA mRNA downstream 633137 15047768 ~ 15064170 (+) True CI01000304_15047768_15063987
CI01000304_15140709_15147357.mRNA mRNA downstream 725930 15140561 ~ 15147557 (+) True CI01000304_15140709_15147357
TU489538 other upstream 83484 14330048 ~ 14330886 (+) True G426312
TU489575 other upstream 835523 13556451 ~ 13573943 (+) True G426349
TU488854 other upstream 1975284 12434972 ~ 12439086 (+) False CI01000304_12437868_12439019
TU490061 other downstream 534259 14948890 ~ 14950592 (+) True G426828
TU491290 other downstream 1470823 15885454 ~ 15889591 (+) True G427860
TU491458 other downstream 1668599 16083230 ~ 16083714 (+) True G428017
TU491561 other downstream 2090231 16513714 ~ 16541045 (+) True G428096
TU491635 other downstream 2341315 16755946 ~ 16761111 (+) True G428157

Expression Profile