Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU491561 |
| length | 27286 |
| RNA type | TUCP |
| GC content | 0.38 |
| exon number | 3 |
| gene id | G428096 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 16513714 ~ 16541045 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU491522 | lncRNA | upstream | 81913 | 16422747 ~ 16422949 (+) | True | G428069 |
| TU491296 | lncRNA | upstream | 284454 | 16220030 ~ 16220408 (+) | True | G427866 |
| TU491298 | lncRNA | upstream | 284925 | 16218447 ~ 16219937 (+) | True | G427868 |
| TU491468 | lncRNA | upstream | 374782 | 16129707 ~ 16130080 (+) | True | G428027 |
| TU491294 | lncRNA | upstream | 407369 | 16091400 ~ 16097493 (+) | True | G427864 |
| TU491583 | lncRNA | downstream | 108847 | 16649892 ~ 16654939 (+) | True | G428116 |
| TU491669 | lncRNA | downstream | 190562 | 16731607 ~ 16731828 (+) | True | G428188 |
| TU491678 | lncRNA | downstream | 238318 | 16779363 ~ 16780995 (+) | True | G428197 |
| TU491682 | lncRNA | downstream | 251248 | 16792293 ~ 16792623 (+) | True | G428201 |
| TU491713 | lncRNA | downstream | 312505 | 16853550 ~ 16853767 (+) | True | G428232 |
| CI01000304_16470293_16490666.mRNA | mRNA | upstream | 12821 | 16470253 ~ 16492041 (+) | True | CI01000304_16470293_16490666 |
| CI01000304_16458657_16462430.mRNA | mRNA | upstream | 41839 | 16458520 ~ 16463023 (+) | True | CI01000304_16458657_16462430 |
| CI01000304_16433456_16438415.mRNA | mRNA | upstream | 66331 | 16432429 ~ 16438531 (+) | True | CI01000304_16433456_16438415 |
| CI01000304_16406577_16413911.mRNA | mRNA | upstream | 90639 | 16406067 ~ 16414223 (+) | True | CI01000304_16406577_16413911 |
| CI01000304_16370076_16401491.mRNA | mRNA | upstream | 103248 | 16369970 ~ 16401614 (+) | True | CI01000304_16370076_16401491 |
| CI01000304_16565077_16641637.mRNA | mRNA | downstream | 24032 | 16565077 ~ 16642341 (+) | True | CI01000304_16565077_16641637 |
| CI01000304_16740135_16740524.mRNA | mRNA | downstream | 197801 | 16738846 ~ 16740995 (+) | True | CI01000304_16740135_16740524 |
| CI01000304_16743239_16743811.mRNA | mRNA | downstream | 201458 | 16742503 ~ 16743811 (+) | True | CI01000304_16743239_16743811 |
| CI01000304_16761621_16764983.mRNA | mRNA | downstream | 220576 | 16761621 ~ 16765057 (+) | False | CI01000304_16761621_16764983 |
| CI01000304_16830439_16835774.mRNA | mRNA | downstream | 289394 | 16830439 ~ 16836287 (+) | True | CI01000304_16830439_16835774 |
| TU491458 | other | upstream | 421148 | 16083230 ~ 16083714 (+) | True | G428017 |
| TU491290 | other | upstream | 615271 | 15885454 ~ 15889591 (+) | True | G427860 |
| TU490061 | other | upstream | 1554270 | 14948890 ~ 14950592 (+) | True | G426828 |
| TU489538 | other | upstream | 2173976 | 14330048 ~ 14330886 (+) | True | G426312 |
| TU489575 | other | upstream | 2926015 | 13556451 ~ 13573943 (+) | True | G426349 |
| TU491635 | other | downstream | 214901 | 16755946 ~ 16761111 (+) | True | G428157 |
| TU491628 | other | downstream | 469685 | 17010730 ~ 17017194 (+) | False | CI01000304_17009769_17023302 |
| TU491773 | other | downstream | 773793 | 17314838 ~ 17314930 (+) | True | G428289 |
| TU492630 | other | downstream | 1141226 | 17682271 ~ 17684763 (+) | True | G429050 |
| TU492542 | other | downstream | 1162265 | 17703310 ~ 17704096 (+) | True | CI01000304_17698564_17703891 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| striped catfish (Pangasianodon hypophthalmus) | TU210396 | True | 6804 | lncRNA | 0.39 | 2 | NC_047605.1 | 7728913 ~ 7750806 (-) |
