RNA id: TU509610



Basic Information


Item Value
RNA id TU509610
length 279
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G443930
representative True

Chromosome Information


Item Value
chromosome id CI01000312
NCBI id null
chromosome length 1039935
location 743175 ~ 743453 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GGGAAACCTTGAGTGACACTTTGGCCTGGCAGAAACAAAACAAAACAAACAAAAAAAAGTCAAAACTAAAAAACAAGCTAAGACAGCAAGTGAGAAAAAACAAGATGAGAAACTAAACTGACAGTCCTGTTTAATAGGAAACAAATTGCTCTCCACTTTCCTGTGACACAGATAGCAGCCCATTTATGCCTGTCCGGCTTTGTTGGGAACAATTGGGAGGAAGTGGTGGGATCCCGAACAGGGATTGGTTTCAGGCCTCGCTGCCCCTCATACTGCTCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU509580 lncRNA downstream 38407 704560 ~ 704768 (-) True G443909
TU509579 lncRNA downstream 38942 704022 ~ 704233 (-) True G443908
TU509575 lncRNA downstream 42887 700059 ~ 700288 (-) True G443904
TU509574 lncRNA downstream 43500 699355 ~ 699675 (-) True G443903
TU509573 lncRNA downstream 43863 699085 ~ 699312 (-) True G443902
TU509611 lncRNA upstream 1542 744995 ~ 745195 (-) True G443931
TU509612 lncRNA upstream 1846 745299 ~ 745524 (-) True G443932
TU509615 lncRNA upstream 11069 754522 ~ 754744 (-) True G443935
TU509644 lncRNA upstream 62292 805745 ~ 805952 (-) True G443961
TU509669 lncRNA upstream 79553 823006 ~ 823228 (-) True G443986
CI01000312_00720528_00726895.mRNA mRNA downstream 15987 719177 ~ 727188 (-) True CI01000312_00720528_00726895
CI01000312_00642862_00646991.mRNA mRNA downstream 95243 641824 ~ 647932 (-) True CI01000312_00642862_00646991
CI01000312_00585354_00590552.mRNA mRNA downstream 152553 584955 ~ 590622 (-) True CI01000312_00585354_00590552
CI01000312_00562199_00564611.mRNA mRNA downstream 178564 562180 ~ 564611 (-) True CI01000312_00562199_00564611
CI01000312_00518402_00527302.mRNA mRNA downstream 215873 518244 ~ 527302 (-) True CI01000312_00518402_00527302
CI01000312_00840984_00842545.mRNA mRNA upstream 97229 840682 ~ 843043 (-) True CI01000312_00840984_00842545
CI01000312_00849493_00850764.mRNA mRNA upstream 105363 848816 ~ 851179 (-) True CI01000312_00849493_00850764
CI01000312_00878228_00881714.mRNA mRNA upstream 134618 878071 ~ 881714 (-) False CI01000312_00878228_00881714
CI01000312_00954156_00962879.mRNA mRNA upstream 210626 954079 ~ 962972 (-) True CI01000312_00954156_00962879
CI01000312_00964529_00968018.mRNA mRNA upstream 221011 964464 ~ 969722 (-) True CI01000312_00964529_00968018
TU509607 other downstream 7362 735468 ~ 735813 (-) True G443927
TU509534 other downstream 135003 604085 ~ 608172 (-) True G443871
TU509688 other upstream 138963 882416 ~ 883690 (-) True G444000

Expression Profile