RNA id: TU511930


Basic Information

Item Value
RNA id TU511930
length 204
lncRNA type inter_gene
GC content 0.54
exon number 1
gene id G445985
representative True

Chromosome Information

Item Value
chromosome id CI01000314
NCBI id null
chromosome length 1736912
location 908171 ~ 908374 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTAAGCAGAGCTGTGCTCATGTGTGCGGGTCTGATGCAGTCTGCCTGATCGGCCGGGGGTCGGGATAGGGCTGATAAAGAGATGACACTGCGGATAAGATAACACAGCCATATAGGAGACATTCAGATGGGGGCAGGAGGAGTGCGATGCAGAATTGGCATCAGATAAAGCGAGAAGGGCCCCTAGAGGGCAGAGAACAATAGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU511848 lncRNA downstream 105009 802786 ~ 803162 (-) True G445904
TU511833 lncRNA downstream 130257 777677 ~ 777914 (-) True G445889
TU511791 lncRNA downstream 190251 717649 ~ 717920 (-) True G445853
TU511788 lncRNA downstream 192604 715243 ~ 715567 (-) True G445850
TU511641 lncRNA downstream 358329 549506 ~ 549842 (-) True G445735
TU512067 lncRNA upstream 7665 929534 ~ 929583 (-) False G446094
TU512066 lncRNA upstream 7756 929534 ~ 929665 (-) False G446094
TU512068 lncRNA upstream 7756 929534 ~ 929583 (-) True G446094
TU512073 lncRNA upstream 30031 938405 ~ 938683 (-) True G446098
TU512077 lncRNA upstream 36275 944649 ~ 944886 (-) True G446102
CI01000314_00705124_00706620.mRNA mRNA downstream 201520 704768 ~ 706651 (-) True CI01000314_00705124_00706620
CI01000314_00660252_00661614.mRNA mRNA downstream 245871 659838 ~ 662300 (-) True CI01000314_00660252_00661614
CI01000314_00357634_00433275.mRNA mRNA downstream 474812 356057 ~ 433359 (-) True CI01000314_00357634_00433275
CI01000314_00345636_00351713.mRNA mRNA downstream 554329 345209 ~ 353842 (-) True CI01000314_00345636_00351713
CI01000314_00328906_00331255.mRNA mRNA downstream 576354 328599 ~ 331817 (-) True CI01000314_00328906_00331255
CI01000314_00916594_00919809.mRNA mRNA upstream 7780 916154 ~ 920514 (-) False CI01000314_00916594_00919809
CI01000314_00931320_00933166.mRNA mRNA upstream 22399 930773 ~ 934321 (-) True CI01000314_00931320_00933166
CI01000314_00961406_01033528.mRNA mRNA upstream 52744 961118 ~ 1033528 (-) True CI01000314_00961406_01033528
CI01000314_01034963_01048224.mRNA mRNA upstream 126589 1034963 ~ 1048224 (-) True CI01000314_01034963_01048224
CI01000314_01160251_01175969.mRNA mRNA upstream 250030 1158404 ~ 1175969 (-) True CI01000314_01160251_01175969
TU512069 other upstream 7756 929273 ~ 929583 (-) True G446094
TU512388 other upstream 708416 1616790 ~ 1618284 (-) True CI01000314_01617434_01617974

Expression Profile