RNA id: TU806117


Basic Information

Item Value
RNA id TU806117
length 222
lncRNA type inter_gene
GC content 0.28
exon number 1
gene id G684746
representative True

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 9640658 ~ 9640879 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AAAAATGTTAAGTAATTTTGTTTAAAAAAAAAAAAAAAATGAAAACTGAAATAAGAATTTAAAAGTTGTTTTTGTATAAAATGCAATCACAGTCCAATTTAAATTTAAAGCAAGTGTACTGTGCCAAAAAAGTAGAAGAAAAAAACTGTAGGCTCTGAACTGAGTCTTTATAATGGGACCAAGTACCGTCAAGCATGAATCAAGCCAACACCACAAGCAAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU806112 lncRNA downstream 4542 9635912 ~ 9636116 (-) True G684741
TU806110 lncRNA downstream 5728 9634549 ~ 9634930 (-) True G684739
TU806105 lncRNA downstream 6162 9633523 ~ 9634496 (-) True G684735
TU806104 lncRNA downstream 6276 9633523 ~ 9634382 (-) False G684735
TU806108 lncRNA downstream 7243 9633130 ~ 9633415 (-) True G684737
TU806122 lncRNA upstream 9048 9649927 ~ 9650144 (-) True G684751
TU806123 lncRNA upstream 9977 9650856 ~ 9651197 (-) True G684752
TU806305 lncRNA upstream 45172 9686051 ~ 9687659 (-) True G684912
TU806301 lncRNA upstream 47534 9688413 ~ 9690766 (-) True G684911
TU806294 lncRNA upstream 53555 9694434 ~ 9697780 (-) True G684905
CI01180000_09568657_09570949.mRNA mRNA downstream 69530 9567425 ~ 9571128 (-) True CI01180000_09568657_09570949
CI01180000_09515348_09519388.mRNA mRNA downstream 121270 9514397 ~ 9519388 (-) True CI01180000_09515348_09519388
CI01180000_09389794_09446057.mRNA mRNA downstream 194601 9389794 ~ 9446057 (-) True CI01180000_09389794_09446057
CI01180000_09367707_09378410.mRNA mRNA downstream 262195 9367595 ~ 9378463 (-) True CI01180000_09367707_09378410
CI01180000_09361267_09366764.mRNA mRNA downstream 273894 9360894 ~ 9366764 (-) True CI01180000_09361267_09366764
CI01180000_09712937_09715071.mRNA mRNA upstream 71852 9712731 ~ 9715548 (-) False CI01180000_09712937_09715071
CI01180000_09797406_09801305.mRNA mRNA upstream 156214 9797093 ~ 9801321 (-) True CI01180000_09797406_09801305
CI01180000_09862542_09863408.mRNA mRNA upstream 221257 9862136 ~ 9863760 (-) False CI01180000_09862542_09863408
CI01180000_09880982_09883947.mRNA mRNA upstream 239931 9880810 ~ 9884190 (-) True CI01180000_09880982_09883947
CI01180000_09889952_09893572.mRNA mRNA upstream 248563 9889442 ~ 9893572 (-) True CI01180000_09889952_09893572
TU805835 other downstream 916791 8722693 ~ 8723867 (-) True G684493
TU805466 other downstream 1729450 7910761 ~ 7911208 (-) False G684182
TU805357 other downstream 2057855 7579404 ~ 7582803 (-) True G684080
TU805347 other downstream 2115004 7506890 ~ 7525654 (-) True G684071
TU805292 other downstream 2227526 7403984 ~ 7413132 (-) True G684018
TU806323 other upstream 257545 9898424 ~ 9901388 (-) True G684929
TU807544 other upstream 1700737 11341616 ~ 11343496 (-) True G686052

Expression Profile