RNA id: TU806363


Basic Information

Item Value
RNA id TU806363
length 200
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G684967
representative True

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 9782760 ~ 9782959 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTGGCATTTATAAAAAGCGTGTGAGGTGGAGAAAGAGGTGGAGTGAAAGTATGAGTGAGAAAGGAAAAAAGACAAAAAAAAAAGAAAAAAGAATAAGGGAAAGAGAGAGGGGCGGTTTTTGTCATCATATCTCCAAAGCCTCAGTTCTGCATTAGGCTCATGGAAAACTACTTAGAACTCCAGACGTGCTAGTCTTGCCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU806357 lncRNA downstream 17167 9765211 ~ 9765593 (-) True G684961
TU806355 lncRNA downstream 28533 9752749 ~ 9754227 (-) True G684959
TU806352 lncRNA downstream 31964 9750571 ~ 9750796 (-) True G684956
TU806342 lncRNA downstream 41987 9740549 ~ 9740773 (-) True G684946
TU806291 lncRNA downstream 67722 9712381 ~ 9715038 (-) True CI01180000_09712937_09715071
TU806332 lncRNA upstream 74589 9857548 ~ 9859444 (-) True G684936
TU806388 lncRNA upstream 80322 9863281 ~ 9863602 (-) True CI01180000_09862542_09863408
TU806390 lncRNA upstream 101322 9884281 ~ 9884485 (-) True G684994
TU806325 lncRNA upstream 112357 9895316 ~ 9898697 (-) False G684929
TU806404 lncRNA upstream 163046 9946005 ~ 9946235 (-) True G685008
CI01180000_09712937_09715071.mRNA mRNA downstream 67212 9712731 ~ 9715548 (-) False CI01180000_09712937_09715071
CI01180000_09568657_09570949.mRNA mRNA downstream 211632 9567425 ~ 9571128 (-) True CI01180000_09568657_09570949
CI01180000_09515348_09519388.mRNA mRNA downstream 263372 9514397 ~ 9519388 (-) True CI01180000_09515348_09519388
CI01180000_09389794_09446057.mRNA mRNA downstream 336703 9389794 ~ 9446057 (-) True CI01180000_09389794_09446057
CI01180000_09367707_09378410.mRNA mRNA downstream 404297 9367595 ~ 9378463 (-) True CI01180000_09367707_09378410
CI01180000_09797406_09801305.mRNA mRNA upstream 14134 9797093 ~ 9801321 (-) True CI01180000_09797406_09801305
CI01180000_09862542_09863408.mRNA mRNA upstream 79177 9862136 ~ 9863760 (-) False CI01180000_09862542_09863408
CI01180000_09880982_09883947.mRNA mRNA upstream 97851 9880810 ~ 9884190 (-) True CI01180000_09880982_09883947
CI01180000_09889952_09893572.mRNA mRNA upstream 106483 9889442 ~ 9893572 (-) True CI01180000_09889952_09893572
CI01180000_10043847_10061741.mRNA mRNA upstream 260842 10043801 ~ 10062468 (-) True CI01180000_10043847_10061741
TU805835 other downstream 1058893 8722693 ~ 8723867 (-) True G684493
TU805466 other downstream 1871552 7910761 ~ 7911208 (-) False G684182
TU805357 other downstream 2199957 7579404 ~ 7582803 (-) True G684080
TU805347 other downstream 2257106 7506890 ~ 7525654 (-) True G684071
TU805292 other downstream 2369628 7403984 ~ 7413132 (-) True G684018
TU806323 other upstream 115465 9898424 ~ 9901388 (-) True G684929
TU807544 other upstream 1558657 11341616 ~ 11343496 (-) True G686052

Expression Profile