RNA id: TU806390



Basic Information


Item Value
RNA id TU806390
length 205
lncRNA type inter_gene
GC content 0.30
exon number 1
gene id G684994
representative True

Chromosome Information


Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 9884281 ~ 9884485 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CTTCTGCATTGTTAGAAATATTTCAAGATGAACATTTACTAGAGCAACTTAGATTTACTTGATTATCCAATCCATACATCATTTTTATACATGCCTATAAAAATCGCGTTAATAAAATTTGTTTAATACAACATGCTTTCGAGAATCGTTTAACGTAGACCTTCCATTTATAGCTCTCAATCAGCATTGCATTATATATTTTGCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU806388 lncRNA downstream 20679 9863281 ~ 9863602 (-) True CI01180000_09862542_09863408
TU806332 lncRNA downstream 24837 9857548 ~ 9859444 (-) True G684936
TU806363 lncRNA downstream 101322 9782760 ~ 9782959 (-) True G684967
TU806357 lncRNA downstream 118688 9765211 ~ 9765593 (-) True G684961
TU806355 lncRNA downstream 130054 9752749 ~ 9754227 (-) True G684959
TU806325 lncRNA upstream 10831 9895316 ~ 9898697 (-) False G684929
TU806404 lncRNA upstream 61520 9946005 ~ 9946235 (-) True G685008
TU806405 lncRNA upstream 63869 9948354 ~ 9948919 (-) True G685009
TU806985 lncRNA upstream 184957 10069442 ~ 10070214 (-) True G685534
TU807060 lncRNA upstream 391932 10276417 ~ 10290496 (-) True G685593
CI01180000_09880982_09883947.mRNA mRNA downstream 91 9880810 ~ 9884190 (-) True CI01180000_09880982_09883947
CI01180000_09862542_09863408.mRNA mRNA downstream 20521 9862136 ~ 9863760 (-) False CI01180000_09862542_09863408
CI01180000_09797406_09801305.mRNA mRNA downstream 82960 9797093 ~ 9801321 (-) True CI01180000_09797406_09801305
CI01180000_09712937_09715071.mRNA mRNA downstream 168733 9712731 ~ 9715548 (-) False CI01180000_09712937_09715071
CI01180000_09568657_09570949.mRNA mRNA downstream 313153 9567425 ~ 9571128 (-) True CI01180000_09568657_09570949
CI01180000_09889952_09893572.mRNA mRNA upstream 4957 9889442 ~ 9893572 (-) True CI01180000_09889952_09893572
CI01180000_10043847_10061741.mRNA mRNA upstream 159316 10043801 ~ 10062468 (-) True CI01180000_10043847_10061741
CI01180000_10128340_10143434.mRNA mRNA upstream 243495 10127980 ~ 10143930 (-) True CI01180000_10128340_10143434
CI01180000_10179967_10185510.mRNA mRNA upstream 295295 10179780 ~ 10185510 (-) True CI01180000_10179967_10185510
CI01180000_10373880_10377493.mRNA mRNA upstream 488545 10373030 ~ 10378736 (-) True CI01180000_10373880_10377493
TU805835 other downstream 1160414 8722693 ~ 8723867 (-) True G684493
TU805466 other downstream 1973073 7910761 ~ 7911208 (-) False G684182
TU805357 other downstream 2301478 7579404 ~ 7582803 (-) True G684080
TU805347 other downstream 2358627 7506890 ~ 7525654 (-) True G684071
TU805292 other downstream 2471149 7403984 ~ 7413132 (-) True G684018
TU806323 other upstream 13939 9898424 ~ 9901388 (-) True G684929
TU807544 other upstream 1457131 11341616 ~ 11343496 (-) True G686052

Expression Profile