Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00002936 |
| length | 1224 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 4 |
| gene id | XLOC_001129 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007112.7 |
| NCBI id | CM002885.2 |
| chromosome length | 59578282 |
| location | 17330266 ~ 17361278 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0033036 | macromolecule localization | biological_process |
| GO:0008104 | protein localization | biological_process |
| GO:0044444 | obsolete cytoplasmic part | cellular_component |
| GO:0000145 | exocyst | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00001783 | lncRNA | downstream | 641377 | 16679330 ~ 16688889 (-) | True | XLOC_001121 |
| TCONS_00003378 | lncRNA | downstream | 658930 | 16669825 ~ 16671336 (-) | True | XLOC_001120 |
| TCONS_00001778 | lncRNA | downstream | 672413 | 16655702 ~ 16657853 (-) | True | XLOC_001119 |
| TCONS_00001776 | lncRNA | downstream | 822483 | 16506703 ~ 16507783 (-) | True | XLOC_001118 |
| TCONS_00003377 | lncRNA | downstream | 846364 | 16482924 ~ 16483902 (-) | True | XLOC_001117 |
| TCONS_00001800 | lncRNA | upstream | 311482 | 17672760 ~ 17674970 (-) | True | XLOC_001134 |
| TCONS_00003380 | lncRNA | upstream | 518154 | 17879432 ~ 17885732 (-) | True | XLOC_001140 |
| TCONS_00002937 | lncRNA | upstream | 611601 | 17972879 ~ 17975272 (-) | False | XLOC_001141 |
| TCONS_00003381 | lncRNA | upstream | 612028 | 17973306 ~ 17975049 (-) | True | XLOC_001141 |
| TCONS_00001813 | lncRNA | upstream | 641289 | 18002567 ~ 18004302 (-) | False | XLOC_001142 |
| TCONS_00001779 | mRNA | downstream | 641243 | 16673841 ~ 16689023 (-) | False | XLOC_001121 |
| TCONS_00001780 | mRNA | downstream | 641301 | 16675264 ~ 16688965 (-) | False | XLOC_001121 |
| TCONS_00001782 | mRNA | downstream | 654089 | 16675421 ~ 16676177 (-) | False | XLOC_001121 |
| TCONS_00001777 | mRNA | downstream | 665222 | 16654254 ~ 16665044 (-) | False | XLOC_001119 |
| TCONS_00001775 | mRNA | downstream | 822454 | 16484211 ~ 16507812 (-) | False | XLOC_001118 |
| TCONS_00001793 | mRNA | upstream | 176173 | 17537451 ~ 17587552 (-) | False | XLOC_001131 |
| TCONS_00001794 | mRNA | upstream | 177653 | 17538931 ~ 17569793 (-) | False | XLOC_001131 |
| TCONS_00001796 | mRNA | upstream | 194666 | 17555944 ~ 17570013 (-) | True | XLOC_001131 |
| TCONS_00001797 | mRNA | upstream | 256737 | 17618015 ~ 17650223 (-) | True | XLOC_001132 |
| TCONS_00001798 | mRNA | upstream | 291110 | 17652388 ~ 17663108 (-) | True | XLOC_001133 |
| TCONS_00001790 | other | downstream | 388836 | 16941215 ~ 16941430 (-) | True | XLOC_001128 |
| TCONS_00001789 | other | downstream | 390885 | 16939166 ~ 16939381 (-) | True | XLOC_001127 |
| TCONS_00001788 | other | downstream | 392633 | 16937417 ~ 16937633 (-) | True | XLOC_001126 |
| TCONS_00001787 | other | downstream | 394655 | 16935395 ~ 16935611 (-) | True | XLOC_001125 |
| TCONS_00001786 | other | downstream | 397465 | 16932586 ~ 16932801 (-) | True | XLOC_001124 |
| TCONS_00001792 | other | upstream | 104678 | 17465956 ~ 17466455 (-) | True | XLOC_001130 |
| TCONS_00001795 | other | upstream | 182263 | 17543541 ~ 17547267 (-) | False | XLOC_001131 |
| TCONS_00001806 | other | upstream | 338204 | 17699482 ~ 17702810 (-) | False | XLOC_001137 |
| TCONS_00001817 | other | upstream | 826334 | 18187612 ~ 18237671 (-) | False | XLOC_001144 |
| TCONS_00001818 | other | upstream | 873229 | 18234507 ~ 18237587 (-) | True | XLOC_001144 |
