RNA id: TCONS_00024140


Basic Information

Item Value
RNA id TCONS_00024140
length 118
RNA type rRNA
GC content 0.54
exon number 1
gene id XLOC_012252
representative True

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 36635072 ~ 36635189 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TCTTGCGTCTAGCTTGCTccctgcaactctcacatggttgcccactgaagctaagcagggctgcacctggtcagtacctggatgggagaccacatgggaaagttttttgctgccggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000115762

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00024953 lncRNA downstream 148973 36482587 ~ 36486099 (-) False XLOC_012250
TCONS_00024135 lncRNA downstream 158338 36446514 ~ 36476734 (-) True XLOC_012249
TCONS_00024952 lncRNA downstream 170551 36446514 ~ 36464521 (-) False XLOC_012249
TCONS_00024950 lncRNA downstream 294493 36214510 ~ 36340579 (-) False XLOC_012248
TCONS_00024951 lncRNA downstream 294499 36310866 ~ 36340573 (-) True XLOC_012248
TCONS_00024141 lncRNA upstream 38295 36673484 ~ 36675877 (-) True XLOC_012253
TCONS_00024167 lncRNA upstream 656266 37291455 ~ 37299381 (-) True XLOC_012264
TCONS_00024954 lncRNA upstream 727835 37363024 ~ 37365357 (-) True XLOC_012267
TCONS_00024173 lncRNA upstream 752790 37387979 ~ 37395447 (-) True XLOC_012268
TCONS_00024955 lncRNA upstream 1133452 37768641 ~ 37771340 (-) True XLOC_012271
TCONS_00024138 mRNA downstream 105623 36516695 ~ 36529449 (-) False XLOC_012251
TCONS_00024139 mRNA downstream 106056 36516697 ~ 36529016 (-) True XLOC_012251
TCONS_00024137 mRNA downstream 121136 36483393 ~ 36513936 (-) True XLOC_012250
TCONS_00024136 mRNA downstream 151285 36483287 ~ 36483787 (-) False XLOC_012250
TCONS_00024131 mRNA downstream 753231 35878544 ~ 35881841 (-) False XLOC_012247
TCONS_00024142 mRNA upstream 51905 36687094 ~ 36818176 (-) False XLOC_012254
TCONS_00024143 mRNA upstream 51911 36687100 ~ 36841981 (-) False XLOC_012254
TCONS_00024145 mRNA upstream 51984 36687173 ~ 36842267 (-) False XLOC_012254
TCONS_00024144 mRNA upstream 51984 36687173 ~ 36842267 (-) True XLOC_012254
TCONS_00024147 mRNA upstream 213597 36848786 ~ 36860265 (-) False XLOC_012255
TCONS_00024130 other downstream 1016968 35617986 ~ 35618104 (-) True XLOC_012246
TCONS_00024124 other downstream 1396760 35228588 ~ 35238312 (-) True XLOC_012241
TCONS_00024114 other downstream 2921895 33699379 ~ 33713177 (-) False XLOC_012236
TCONS_00024113 other downstream 2929608 33691698 ~ 33705464 (-) False XLOC_012236
TCONS_00024101 other downstream 3395786 33238317 ~ 33239286 (-) True XLOC_012231
TCONS_00024159 other upstream 315249 36950438 ~ 36950555 (-) True XLOC_012260
TCONS_00024168 other upstream 674140 37309329 ~ 37309446 (-) True XLOC_012265
TCONS_00024169 other upstream 675473 37310662 ~ 37311810 (-) False XLOC_012266
TCONS_00024174 other upstream 754814 37390003 ~ 37390117 (-) True XLOC_012269
TCONS_00024188 other upstream 2352107 38987296 ~ 38987415 (-) True XLOC_012280

Expression Profile

//