RNA id: TU75823



Basic Information


Item Value
RNA id TU75823
length 267
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G68498
representative True

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 62568353 ~ 62568619 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TAGAGTTTACTGCCTTCCTTTTAATCtgaaaaaagccatattacaacctgtgtgtggtgataattgcgttgtttgctctataacctgttaattcatatgccTTGCAACTGTGATATATATAGaggcctaaaggcagagacaataagaagacacagtggcagagtaaattcaaccacacctttgttttatcacaaaaccggATAGCACCCTGTACAGTAACAGACAgcagctgcctccactattccagtaccatttcaacttcaacat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU75802 lncRNA upstream 27920 62540115 ~ 62540433 (+) True G68479
TU75785 lncRNA upstream 32412 62535608 ~ 62535941 (+) True G68472
TU75782 lncRNA upstream 35815 62532169 ~ 62532538 (+) True G68469
TU75678 lncRNA upstream 152229 62414680 ~ 62416124 (+) True G68384
TU75404 lncRNA upstream 585432 61981733 ~ 61982921 (+) True G68132
TU75800 lncRNA downstream 41130 62609749 ~ 62610025 (+) True G68477
TU75801 lncRNA downstream 44046 62612665 ~ 62617264 (+) True G68478
TU75855 lncRNA downstream 51699 62620318 ~ 62620552 (+) True G68530
TU75787 lncRNA downstream 57780 62626399 ~ 62630539 (+) True LOC110526580
TU75872 lncRNA downstream 90302 62658921 ~ 62659149 (+) True G68547
XM_021607603.2 mRNA upstream 42051 62505171 ~ 62526302 (+) True LOC110526548
XM_036982179.1 mRNA upstream 75442 62460060 ~ 62492911 (+) False LOC110526533
XM_021607652.2 mRNA downstream 17245 62585864 ~ 62608428 (+) False LOC110526555
XM_021607617.2 mRNA downstream 17246 62585865 ~ 62608428 (+) False LOC110526555
XM_021607644.2 mRNA downstream 17246 62585865 ~ 62608428 (+) False LOC110526555
XM_021607661.2 mRNA downstream 17248 62585867 ~ 62608428 (+) False LOC110526555
XM_021607625.2 mRNA downstream 17418 62586037 ~ 62608428 (+) False LOC110526555
TU75188 other upstream 834965 61729765 ~ 61733388 (+) True G67930
TU75047 other upstream 1253101 61314874 ~ 61315252 (+) True G67806
TU73321 other upstream 2626289 59941486 ~ 59942064 (+) True G66188
TU72488 other upstream 3243224 59324636 ~ 59325129 (+) True G65442
TU71284 other upstream 3867974 58699296 ~ 58700379 (+) True G64338
TU77508 other downstream 706344 63274963 ~ 63275296 (+) True G70011
TU79281 other downstream 2240970 64809589 ~ 64901624 (+) True LOC110526969
TU80728 other downstream 3347116 65915735 ~ 65922285 (+) False LOC110527164
TU80729 other downstream 3347116 65915735 ~ 65922285 (+) True LOC110527164
TU81252 other downstream 3719060 66287679 ~ 66288469 (+) True G73515

Expression Profile