Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021597203.2 |
| length | 1055 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 5 |
| gene id | LOC110520125 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 49979196 ~ 49981870 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0015986 | ATP synthesis coupled proton transport | biological_process |
| GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0008289 | lipid binding | molecular_function |
| GO:0015078 | proton transmembrane transporter activity | molecular_function |
| id | description |
|---|---|
| K02128 | ATPeF0C, ATP5G, ATP9; F-type H+-transporting ATPase subunit c |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU305138 | lncRNA | downstream | 17983 | 49960915 ~ 49961213 (-) | True | G268560 |
| TU305123 | lncRNA | downstream | 33431 | 49940876 ~ 49945765 (-) | False | G268548 |
| TU305125 | lncRNA | downstream | 33431 | 49940876 ~ 49945765 (-) | True | G268548 |
| TU305043 | lncRNA | downstream | 48534 | 49922997 ~ 49930662 (-) | True | G268470 |
| TU305030 | lncRNA | downstream | 97376 | 49879111 ~ 49881820 (-) | True | LOC110520120 |
| TU305266 | lncRNA | upstream | 64056 | 50045926 ~ 50046290 (-) | True | G268673 |
| TU305294 | lncRNA | upstream | 95914 | 50077784 ~ 50077987 (-) | True | G268700 |
| TU305295 | lncRNA | upstream | 96249 | 50078119 ~ 50078323 (-) | True | G268701 |
| TU305296 | lncRNA | upstream | 98613 | 50080483 ~ 50080686 (-) | True | G268702 |
| TU305316 | lncRNA | upstream | 127070 | 50108940 ~ 50109195 (-) | True | G268722 |
| XM_021597198.2 | mRNA | downstream | 304 | 49962467 ~ 49978892 (-) | True | atf2 |
| XM_036974452.1 | mRNA | downstream | 1076 | 49962467 ~ 49978120 (-) | False | atf2 |
| XM_021597199.2 | mRNA | downstream | 1079 | 49962467 ~ 49978117 (-) | False | atf2 |
| XM_021597200.2 | mRNA | downstream | 1079 | 49962467 ~ 49978117 (-) | False | atf2 |
| XM_036974450.1 | mRNA | downstream | 58868 | 49905433 ~ 49920328 (-) | True | LOC110520122 |
| XM_036974457.1 | mRNA | upstream | 102230 | 50084100 ~ 50099551 (-) | False | lnpa |
| XM_036974458.1 | mRNA | upstream | 102230 | 50084100 ~ 50099551 (-) | False | lnpa |
| XM_036974456.1 | mRNA | upstream | 102230 | 50084100 ~ 50099687 (-) | False | lnpa |
| XM_036974455.1 | mRNA | upstream | 102230 | 50084100 ~ 50099697 (-) | True | lnpa |
| XM_036974459.1 | mRNA | upstream | 137799 | 50119669 ~ 50124620 (-) | True | evx2 |
| TU305117 | other | downstream | 77658 | 49900173 ~ 49901538 (-) | True | LOC110520121 |
| TU305027 | other | downstream | 107551 | 49867217 ~ 49871645 (-) | True | LOC110520119 |
| TU304905 | other | downstream | 411722 | 49563848 ~ 49567474 (-) | True | LOC110520112 |
| TU304903 | other | downstream | 413207 | 49563848 ~ 49565989 (-) | False | LOC110520112 |
| TU304858 | other | downstream | 476225 | 49502416 ~ 49502971 (-) | True | LOC118944672 |
| TU306341 | other | upstream | 458335 | 50440205 ~ 50442872 (-) | True | LOC110520139 |
| TU306786 | other | upstream | 1146570 | 51128440 ~ 51129310 (-) | True | LOC110520160 |
| TU307414 | other | upstream | 1491454 | 51473324 ~ 51474139 (-) | True | fgf9 |
| TU307458 | other | upstream | 1615529 | 51597399 ~ 51599898 (-) | False | il1rl1 |
| TU307459 | other | upstream | 1616065 | 51597935 ~ 51600230 (-) | True | il1rl1 |
