Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU258776 |
| length | 338 |
| lncRNA type | intronic |
| GC content | 0.54 |
| exon number | 1 |
| gene id | G226231 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 13246553 ~ 13246890 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU258771 | lncRNA | downstream | 19982 | 13226361 ~ 13226571 (-) | True | G226226 |
| TU258770 | lncRNA | downstream | 21212 | 13225042 ~ 13225341 (-) | True | G226225 |
| TU258768 | lncRNA | downstream | 22875 | 13223274 ~ 13223678 (-) | True | G226223 |
| TU258745 | lncRNA | downstream | 24580 | 13218202 ~ 13221973 (-) | True | G226200 |
| TU258746 | lncRNA | downstream | 28690 | 13217657 ~ 13217863 (-) | True | G226201 |
| TU258777 | lncRNA | upstream | 194 | 13247084 ~ 13247459 (-) | True | G226232 |
| TU258779 | lncRNA | upstream | 1481 | 13248371 ~ 13248624 (-) | True | G226234 |
| TU258781 | lncRNA | upstream | 3037 | 13249927 ~ 13250212 (-) | True | G226236 |
| TU258782 | lncRNA | upstream | 3753 | 13250643 ~ 13250857 (-) | True | G226237 |
| TU258783 | lncRNA | upstream | 4043 | 13250933 ~ 13251338 (-) | True | G226238 |
| XM_021581457.2 | mRNA | downstream | 317489 | 12925454 ~ 12929064 (-) | False | cxcr3.1 |
| NM_001124423.1 | mRNA | downstream | 317552 | 12925622 ~ 12929001 (-) | True | cxcr3.1 |
| LOC110503616 | mRNA | downstream | 363537 | 12880885 ~ 12883016 (-) | True | LOC110503616 |
| XM_021591169.2 | mRNA | downstream | 370865 | 12864942 ~ 12875688 (-) | True | tlr21 |
| XM_021591157.2 | mRNA | downstream | 385964 | 12856694 ~ 12860589 (-) | True | LOC110509927 |
| XM_021591500.2 | mRNA | upstream | 92303 | 13339193 ~ 13341845 (-) | False | LOC110510146 |
| XM_021591509.2 | mRNA | upstream | 92895 | 13339785 ~ 13341845 (-) | True | LOC110510146 |
| XM_036969665.1 | mRNA | upstream | 99219 | 13346109 ~ 13347872 (-) | True | LOC110510138 |
| LOC110503661 | mRNA | upstream | 112992 | 13359882 ~ 13360962 (-) | True | LOC110503661 |
| XM_021591465.2 | mRNA | upstream | 129965 | 13376855 ~ 13378759 (-) | True | LOC110510120 |
| TU258769 | other | downstream | 22038 | 13223884 ~ 13224515 (-) | True | G226224 |
| TU258728 | other | downstream | 66281 | 13177178 ~ 13180272 (-) | True | G226187 |
| TU258665 | other | downstream | 179196 | 13066873 ~ 13067357 (-) | True | G226124 |
| TU257501 | other | downstream | 773493 | 12472299 ~ 12473060 (-) | True | G225171 |
| TU257449 | other | downstream | 788762 | 12454388 ~ 12457791 (-) | True | G225127 |
| TU258842 | other | upstream | 97184 | 13344074 ~ 13344375 (-) | True | G226294 |
| TU259125 | other | upstream | 679784 | 13926674 ~ 13927833 (-) | True | wu:fe05a04 |
| TU259117 | other | upstream | 752846 | 13999736 ~ 14001808 (-) | True | LOC110538195 |
| TU259726 | other | upstream | 1181903 | 14428793 ~ 14475166 (-) | True | G227060 |
| TU259714 | other | upstream | 1276290 | 14523180 ~ 14524854 (-) | False | psenen |
