RNA id: TCONS_00029673


Basic Information

Item Value
RNA id TCONS_00029673
length 1338
RNA type mRNA
GC content 0.42
exon number 2
gene id XLOC_015074
representative True

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 48308750 ~ 48312109 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

agacacacacacacacacagaaacacaaacacacacacacacctgcatccaCACACACCTGTGAATATAAGAGCAGAGGAAGGAGAAGCAGATTATTCTGAAGACGGATCTCAGACTGAACACATCATGAAGATCTGGATCGCTCTGCTTCTGCTCATCACACACACTCagGCTCAGAGCAATGTGGGACCAACACAAACACCACCACcaacaccaccaccaacaacaacaacaaccaccatAAGTACATCCACAGCCAATGCCAAAACAGATACGACTGCAgaaactactacaactactgtaGCCCCGACTACAGAAACCACTACGACCATCAGCCCACACACTGCAAGCGCAACCACAGTCCAACACGAGAGTTCAACAACTGGTGCAAACACCTTGACCAGCACAGGCGCTCCAGACACAAATACTCCAACTAAAGCAGAGCATCCAACAACCAGTCCAGAAACTCACACTCCagcaaacacaacaacaacaaacaccacaacaacaacaaacacaaacataacaaccacaaacacaaacacaaacacaacaacaaccacaaacacaacaacaacaacaaagcccTCCACAGCTCCATCATCTGCAAGCAGTACCAAAACCAACCCAGCAGAGAAAACCACCAGCACCTCCACCTTCAGCACTGTGAAGACCACCTCCTCCAGCGGGTCCCTGAGAGCCTCCGTCAGCTTCAGTGTGGGTGCATTACTGTTCCTGCTGAAGACCCTCTGACACACTCATGGAGAACTACTTTTGCTATTATTTTCAACTGCTTGTAATAAATGATGCCATCAGATTACACAGATACAGCTCATTAAACATCACCTATACGCTATACAGCTGCAGATTAACTGTTTAATTAGAATAACTCATGCTTGATTGTGACTTGAACTTAATCTGATTGCAATGCAATAGTGTGCacatttgtaaagctgctttgatacaataaTCATTGTGAATAATTATAAACTTTGTGATTATTTCTGCCTcagaaaatgcacattttaatgcACAGAAAAGGGATTAAAGTAACTCTCTGTATTGATATGATAAGAGTCTCACAGCTCTACTTTGATGCTTGAAACCACTATAAAACATTCACGCCTCAATCACTGGCATTAGCTTTGCACATACATATTAATCATGTCCATGTGTACACTTctgtttgattaaatgttatcATGTAGACACATTTACAAATATTGCATATAAATTGCCTTGACTGAAAGTGCTTGATGCATCATGTCAGCATTGAATATCTGAAATACAACAATGGTGTAAaggaaacatctgaaaacaataaaaaaaagcactctc

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-141212-237 No description available

Ensembl:

ensembl_id ENSDART00000161103

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00029672 lncRNA downstream 3323 48300582 ~ 48305427 (-) True XLOC_015073
TCONS_00030363 lncRNA downstream 66913 48237650 ~ 48241837 (-) False XLOC_015072
TCONS_00030362 lncRNA downstream 66913 48237650 ~ 48241837 (-) True XLOC_015072
TCONS_00030361 lncRNA downstream 68010 48237650 ~ 48240740 (-) False XLOC_015072
TCONS_00030360 lncRNA downstream 69184 48237650 ~ 48239566 (-) False XLOC_015072
TCONS_00030364 lncRNA upstream 16439 48328548 ~ 48330301 (-) False XLOC_015075
TCONS_00030365 lncRNA upstream 21979 48334088 ~ 48336533 (-) False XLOC_015076
TCONS_00029676 lncRNA upstream 27237 48339346 ~ 48340822 (-) False XLOC_015077
TCONS_00029677 lncRNA upstream 27237 48339346 ~ 48349001 (-) True XLOC_015077
TCONS_00029671 mRNA downstream 1985 48300293 ~ 48306765 (-) False XLOC_015073
TCONS_00029669 mRNA downstream 269244 48037798 ~ 48039506 (-) False XLOC_015070
TCONS_00029670 mRNA downstream 269350 48037939 ~ 48039400 (-) True XLOC_015070
TCONS_00029668 mRNA downstream 289384 48017892 ~ 48019366 (-) True XLOC_015069
TCONS_00029666 mRNA downstream 292822 48003691 ~ 48015928 (-) False XLOC_015068
TCONS_00029674 mRNA upstream 16789 48328898 ~ 48330287 (-) True XLOC_015075
TCONS_00029675 mRNA upstream 22464 48334573 ~ 48336535 (-) True XLOC_015076
TCONS_00029678 mRNA upstream 52203 48364312 ~ 48371092 (-) True XLOC_015078
TCONS_00029679 mRNA upstream 70854 48382963 ~ 48391434 (-) False XLOC_015079
TCONS_00029680 mRNA upstream 71415 48383524 ~ 48389386 (-) False XLOC_015079
TCONS_00029659 other downstream 740902 47567713 ~ 47567848 (-) True XLOC_015061
TCONS_00029643 other downstream 892345 47415590 ~ 47416405 (-) True XLOC_015055
TCONS_00029642 other downstream 908443 47400189 ~ 47400307 (-) True XLOC_015054
TCONS_00029625 other downstream 2285871 46019877 ~ 46022879 (-) False XLOC_015042
TCONS_00029620 other downstream 2348567 45955079 ~ 45960183 (-) True XLOC_015039

Expression Profile

//