Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00031166 |
| length | 942 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 9 |
| gene id | XLOC_015607 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007113.7 |
| NCBI id | CM002886.2 |
| chromosome length | 59640629 |
| location | 33926606 ~ 33952021 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0007018 | microtubule-based movement | biological_process |
| GO:0005813 | centrosome | cellular_component |
| GO:0005819 | spindle | cellular_component |
| GO:0005871 | kinesin complex | cellular_component |
| GO:0005874 | microtubule | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0000166 | nucleotide binding | molecular_function |
| GO:0003777 | microtubule motor activity | molecular_function |
| GO:0008017 | microtubule binding | molecular_function |
| GO:0016887 | ATPase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-070912-298 | Predicted to enable ATP hydrolysis activity; microtubule binding activity; and microtubule motor activity. Predicted to be involved in microtubule-based movement. Predicted to be part of kinesin complex. Predicted to be active in centrosome; microtubule; and spindle. Orthologous to human KIF2C (kinesin family member 2C). |
| ensembl_id | ENSDART00000135884 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00033600 | lncRNA | upstream | 18227 | 33899552 ~ 33908702 (+) | True | XLOC_015604 |
| TCONS_00033274 | lncRNA | upstream | 28197 | 33897470 ~ 33898732 (+) | True | XLOC_015603 |
| TCONS_00033273 | lncRNA | upstream | 155057 | 33759617 ~ 33771872 (+) | True | XLOC_015601 |
| TCONS_00033599 | lncRNA | upstream | 245793 | 33680073 ~ 33681136 (+) | True | XLOC_015593 |
| TCONS_00033598 | lncRNA | upstream | 458759 | 33467112 ~ 33468170 (+) | True | XLOC_015590 |
| TCONS_00033601 | lncRNA | downstream | 241461 | 34181145 ~ 34208131 (+) | False | XLOC_015610 |
| TCONS_00033602 | lncRNA | downstream | 241461 | 34181145 ~ 34356669 (+) | True | XLOC_015610 |
| TCONS_00033275 | lncRNA | downstream | 499761 | 34439445 ~ 34439731 (+) | True | XLOC_015611 |
| TCONS_00033603 | lncRNA | downstream | 538315 | 34477999 ~ 34478878 (+) | True | XLOC_015612 |
| TCONS_00033276 | lncRNA | downstream | 882884 | 34822568 ~ 34822884 (+) | True | XLOC_015614 |
| TCONS_00031161 | mRNA | upstream | 105766 | 33796207 ~ 33821163 (+) | True | XLOC_015602 |
| TCONS_00031159 | mRNA | upstream | 173547 | 33751490 ~ 33753382 (+) | True | XLOC_015599 |
| TCONS_00031158 | mRNA | upstream | 176639 | 33747509 ~ 33750290 (+) | True | XLOC_015598 |
| TCONS_00031157 | mRNA | upstream | 198133 | 33726862 ~ 33728796 (+) | True | XLOC_015597 |
| TCONS_00031156 | mRNA | upstream | 201601 | 33722547 ~ 33725328 (+) | True | XLOC_015596 |
| TCONS_00031168 | mRNA | downstream | 172416 | 34112100 ~ 34126291 (+) | False | XLOC_015608 |
| TCONS_00031169 | mRNA | downstream | 172433 | 34112117 ~ 34126879 (+) | True | XLOC_015608 |
| TCONS_00031170 | mRNA | downstream | 198692 | 34138376 ~ 34173489 (+) | True | XLOC_015609 |
| TCONS_00031171 | mRNA | downstream | 633006 | 34572690 ~ 34984255 (+) | False | XLOC_015613 |
| TCONS_00031172 | mRNA | downstream | 827487 | 34767171 ~ 34982017 (+) | False | XLOC_015613 |
| TCONS_00031163 | other | upstream | 24474 | 33902325 ~ 33902455 (+) | True | XLOC_015606 |
| TCONS_00031162 | other | upstream | 26417 | 33900435 ~ 33900512 (+) | True | XLOC_015605 |
| TCONS_00031160 | other | upstream | 169361 | 33756378 ~ 33757568 (+) | True | XLOC_015600 |
| TCONS_00031140 | other | upstream | 726561 | 33189584 ~ 33200368 (+) | False | XLOC_015585 |
| TCONS_00031127 | other | upstream | 1099676 | 32826503 ~ 32827253 (+) | True | XLOC_015579 |
| TCONS_00031194 | other | downstream | 1891645 | 35831329 ~ 35831445 (+) | True | XLOC_015626 |
| TCONS_00031197 | other | downstream | 2051453 | 35991137 ~ 35998576 (+) | False | XLOC_015629 |
| TCONS_00031204 | other | downstream | 2148085 | 36087769 ~ 36087779 (+) | True | XLOC_015632 |
| TCONS_00031205 | other | downstream | 2148747 | 36088431 ~ 36088479 (+) | True | XLOC_015633 |
| TCONS_00031206 | other | downstream | 2148974 | 36088658 ~ 36088717 (+) | True | XLOC_015634 |
