RNA id: TCONS_00031258



Basic Information


Item Value
RNA id TCONS_00031258
length 903
RNA type mRNA
GC content 0.35
exon number 5
gene id XLOC_015656
representative False

Chromosome Information


Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 36103309 ~ 36157913 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


ACTTCTGGAAGTGGTGCTTACAAGCTTTTCTTTGGAACAGGCACAAAGTTGATAGTTGAAACAAAAACTGAAGTGAAGCCGAATATTTACCAAGTGGGAAACTCATGCCTGGCAACTGACTTCACAAAGCACAACGTGTTCAACATTACCGATTCACCTTTTCTTAAAACGTCGGCTGTCCGATATTCAGGCCAAAATTACTACAGCAGCTTAAAATTCGGCTTAGATGACTGCGAGGAGACAGGCGTTTGTTCATCATCCGGTGGAGGTACAGATTTAGAAAGAGATGAAAAAGTCAACTTCTTGTCACTGGGCATCTTCTGGCTGAGGATTCTCTTTCTGAAGACAGTCGTTTTCAATGTGCTGGTGACTTTCAAAGCATGGATGAGCTAACGTCTCAGAAAAACACCACGTTTCATCAGTTAAATTCATGAGACTGAACTTTTACTGACGACAACAGAAAAAGCTGCATCCCATTCCAGATCATCAGATGTGCACAGATGTTGTTAAATAGCAATGGAGGGATTATATAACCGCCCTCAGTAATGCAAAATCATTATTGATTTGAGAATTACATACACATTTGAATGTCATATGTTTAtataggatttttaaaaatatttcattaagcTTAGCGTACAGTAGAGGTATATTTGTTTCAAATTTAGATTATTTCTCCTGTGTAATTTCTATTTTAAGGTTttctacatatatattttttgtaaacatCTTAAATTGCTTTGGCGCTGTATTACATCTGAATATTTCTGACTATATAGCTACAActtattatttacaattaattTACAACCTATTCATCTCATTAAGTAGATTTGTGCTTTTTTTACATTGGCAGATGTTGTGTACTGTACAAagaatatgcaaataaaatgtgtaaatgac

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000113547

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00031209 lncRNA upstream 19875 36093561 ~ 36094319 (+) True XLOC_015636
TCONS_00033607 lncRNA upstream 35556 36072953 ~ 36078638 (+) True XLOC_015631
TCONS_00033606 lncRNA upstream 499896 35612555 ~ 35614298 (+) False XLOC_015623
TCONS_00031186 lncRNA upstream 508297 35603637 ~ 35605897 (+) False XLOC_015622
TCONS_00033278 lncRNA upstream 532903 35579580 ~ 35581291 (+) True XLOC_015619
TCONS_00033608 lncRNA downstream 22330 36180243 ~ 36367124 (+) False XLOC_015702
TCONS_00033609 lncRNA downstream 22330 36180243 ~ 36583275 (+) False XLOC_015702
TCONS_00033610 lncRNA downstream 87009 36244922 ~ 36247469 (+) True XLOC_015703
TCONS_00033279 lncRNA downstream 221326 36379239 ~ 36425187 (+) False XLOC_015704
TCONS_00033280 lncRNA downstream 266941 36424854 ~ 36471110 (+) True XLOC_015704
TCONS_00031202 mRNA upstream 34287 36046126 ~ 36079907 (+) False XLOC_015631
TCONS_00031203 mRNA upstream 37615 36046192 ~ 36076579 (+) False XLOC_015631
TCONS_00031201 mRNA upstream 92586 36015049 ~ 36021608 (+) True XLOC_015630
TCONS_00031199 mRNA upstream 92948 36004381 ~ 36021246 (+) False XLOC_015630
TCONS_00031200 mRNA upstream 99407 36007449 ~ 36014787 (+) False XLOC_015630
TCONS_00031284 mRNA downstream 448106 36606019 ~ 36608762 (+) False XLOC_015706
TCONS_00031285 mRNA downstream 450474 36608387 ~ 36635858 (+) False XLOC_015706
TCONS_00031286 mRNA downstream 458917 36616830 ~ 36636751 (+) False XLOC_015706
TCONS_00031287 mRNA downstream 458917 36616830 ~ 36636866 (+) False XLOC_015706
TCONS_00031288 mRNA downstream 462098 36620011 ~ 36635859 (+) True XLOC_015706
TCONS_00031256 other upstream 286 36113846 ~ 36113908 (+) True XLOC_015678
TCONS_00031255 other upstream 958 36113177 ~ 36113236 (+) True XLOC_015677
TCONS_00031254 other upstream 1260 36112872 ~ 36112934 (+) True XLOC_015676
TCONS_00031252 other upstream 1867 36112268 ~ 36112327 (+) False XLOC_015656
TCONS_00031251 other upstream 2479 36111650 ~ 36111715 (+) True XLOC_015675
TCONS_00031294 other downstream 595736 36753649 ~ 36753758 (+) True XLOC_015713
TCONS_00031307 other downstream 982561 37140474 ~ 37143617 (+) True XLOC_015719
TCONS_00031312 other downstream 1034528 37192441 ~ 37201587 (+) True XLOC_015720
TCONS_00031331 other downstream 1678706 37836619 ~ 37836920 (+) False XLOC_015734
TCONS_00031335 other downstream 1716858 37874771 ~ 37878304 (+) False XLOC_015735

Expression Profile


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