Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00031200 |
| length | 756 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 6 |
| gene id | XLOC_015630 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007113.7 |
| NCBI id | CM002886.2 |
| chromosome length | 59640629 |
| location | 36004381 ~ 36021608 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | description |
|---|---|
| ko04151 | PI3K-Akt signaling pathway |
| ko04512 | ECM-receptor interaction |
| ko04510 | Focal adhesion |
| ko05200 | Pathways in cancer |
| ko05222 | Small cell lung cancer |
| ko05165 | Human papillomavirus infection |
| ko05146 | Amoebiasis |
| ko05145 | Toxoplasmosis |
| id | description |
|---|---|
| ZDB-GENE-110222-3 | Is expressed in head and pancreatic D cell. Human ortholog(s) of this gene implicated in junctional epidermolysis bullosa; junctional epidermolysis bullosa Herlitz type; junctional epidermolysis bullosa non-Herlitz type; and lung small cell carcinoma. Orthologous to human LAMC2 (laminin subunit gamma 2). |
| ensembl_id | ENSDART00000161837 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00033606 | lncRNA | upstream | 393151 | 35612555 ~ 35614298 (+) | False | XLOC_015623 |
| TCONS_00031186 | lncRNA | upstream | 401552 | 35603637 ~ 35605897 (+) | False | XLOC_015622 |
| TCONS_00033278 | lncRNA | upstream | 426158 | 35579580 ~ 35581291 (+) | True | XLOC_015619 |
| TCONS_00033605 | lncRNA | upstream | 426504 | 35517875 ~ 35580945 (+) | False | XLOC_015619 |
| TCONS_00031183 | lncRNA | upstream | 489020 | 35512002 ~ 35518429 (+) | False | XLOC_015619 |
| TCONS_00033607 | lncRNA | downstream | 58166 | 36072953 ~ 36078638 (+) | True | XLOC_015631 |
| TCONS_00031209 | lncRNA | downstream | 78774 | 36093561 ~ 36094319 (+) | True | XLOC_015636 |
| TCONS_00033608 | lncRNA | downstream | 165456 | 36180243 ~ 36367124 (+) | False | XLOC_015702 |
| TCONS_00033609 | lncRNA | downstream | 165456 | 36180243 ~ 36583275 (+) | False | XLOC_015702 |
| TCONS_00033610 | lncRNA | downstream | 230135 | 36244922 ~ 36247469 (+) | True | XLOC_015703 |
| TCONS_00031198 | mRNA | upstream | 5464 | 35993404 ~ 36001985 (+) | True | XLOC_015629 |
| TCONS_00031196 | mRNA | upstream | 28271 | 35880600 ~ 35979178 (+) | True | XLOC_015628 |
| TCONS_00031195 | mRNA | upstream | 133859 | 35854242 ~ 35873590 (+) | True | XLOC_015627 |
| TCONS_00031192 | mRNA | upstream | 155788 | 35733335 ~ 35851661 (+) | False | XLOC_015625 |
| TCONS_00031201 | mRNA | downstream | 262 | 36015049 ~ 36021608 (+) | True | XLOC_015630 |
| TCONS_00031202 | mRNA | downstream | 31339 | 36046126 ~ 36079907 (+) | False | XLOC_015631 |
| TCONS_00031203 | mRNA | downstream | 31405 | 36046192 ~ 36076579 (+) | False | XLOC_015631 |
| TCONS_00031229 | mRNA | downstream | 88522 | 36103309 ~ 36155743 (+) | False | XLOC_015656 |
| TCONS_00031244 | mRNA | downstream | 94215 | 36109002 ~ 36157911 (+) | False | XLOC_015656 |
| TCONS_00031197 | other | upstream | 8873 | 35991137 ~ 35998576 (+) | False | XLOC_015629 |
| TCONS_00031194 | other | upstream | 176004 | 35831329 ~ 35831445 (+) | True | XLOC_015626 |
| TCONS_00031167 | other | upstream | 2074448 | 33927219 ~ 33933001 (+) | True | XLOC_015607 |
| TCONS_00031163 | other | upstream | 2104994 | 33902325 ~ 33902455 (+) | True | XLOC_015606 |
| TCONS_00031162 | other | upstream | 2106937 | 33900435 ~ 33900512 (+) | True | XLOC_015605 |
| TCONS_00031204 | other | downstream | 72982 | 36087769 ~ 36087779 (+) | True | XLOC_015632 |
| TCONS_00031205 | other | downstream | 73644 | 36088431 ~ 36088479 (+) | True | XLOC_015633 |
| TCONS_00031206 | other | downstream | 73871 | 36088658 ~ 36088717 (+) | True | XLOC_015634 |
| TCONS_00031207 | other | downstream | 74873 | 36089660 ~ 36090680 (+) | True | XLOC_015635 |
| TCONS_00031208 | other | downstream | 78166 | 36092953 ~ 36094319 (+) | False | XLOC_015636 |
