RNA id: TCONS_00031244



Basic Information


Item Value
RNA id TCONS_00031244
length 907
RNA type mRNA
GC content 0.35
exon number 5
gene id XLOC_015656
representative False

Chromosome Information


Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 36103309 ~ 36157913 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


CTTAGTGTGACTCAGGGAGGAGctcagaaaataatatttgggaAAGGCACAAAGCTCACTGTAATTACAGAAACTGAAGTGAAGCCGAATATTTACCAAGTGGGAAACTCATGCCTGGCAACTGACTTCACAAAGCACAACGTGTTCAACATTACCGATTCACCTTTTCTTAAAACGTCGGCTGTCCGATATTCAGGCCAAAATTACTACAGCAGCTTAAAATTCGGCTTAGATGACTGCGAGGAGACAGGCGTTTGTTCATCATCCGGTGGAGGTACAGATTTAGAAAGAGATGAAAAAGTCAACTTCTTGTCACTGGGCATCTTCTGGCTGAGGATTCTCTTTCTGAAGACAGTCGTTTTCAATGTGCTGGTGACTTTCAAAGCATGGATGAGCTAACGTCTCAGAAAAACACCACGTTTCATCAGTTAAATTCATGAGACTGAACTTTTACTGACGACAACAGAAAAAGCTGCATCCCATTCCAGATCATCAGATGTGCACAGATGTTGTTAAATAGCAATGGAGGGATTATATAACCGCCCTCAGTAATGCAAAATCATTATTGATTTGAGAATTACATACACATTTGAATGTCATATGTTTAtataggatttttaaaaatatttcattaagcTTAGCGTACAGTAGAGGTATATTTGTTTCAAATTTAGATTATTTCTCCTGTGTAATTTCTATTTTAAGGTTttctacatatatattttttgtaaacatCTTAAATTGCTTTGGCGCTGTATTACATCTGAATATTTCTGACTATATAGCTACAActtattatttacaattaattTACAACCTATTCATCTCATTAAGTAGATTTGTGCTTTTTTTACATTGGCAGATGTTGTGTACTGTACAAagaatatgcaaataaaatgtgtaaatg

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000158978

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00031209 lncRNA upstream 14683 36093561 ~ 36094319 (+) True XLOC_015636
TCONS_00033607 lncRNA upstream 30364 36072953 ~ 36078638 (+) True XLOC_015631
TCONS_00033606 lncRNA upstream 494704 35612555 ~ 35614298 (+) False XLOC_015623
TCONS_00031186 lncRNA upstream 503105 35603637 ~ 35605897 (+) False XLOC_015622
TCONS_00033278 lncRNA upstream 527711 35579580 ~ 35581291 (+) True XLOC_015619
TCONS_00033608 lncRNA downstream 22332 36180243 ~ 36367124 (+) False XLOC_015702
TCONS_00033609 lncRNA downstream 22332 36180243 ~ 36583275 (+) False XLOC_015702
TCONS_00033610 lncRNA downstream 87011 36244922 ~ 36247469 (+) True XLOC_015703
TCONS_00033279 lncRNA downstream 221328 36379239 ~ 36425187 (+) False XLOC_015704
TCONS_00033280 lncRNA downstream 266943 36424854 ~ 36471110 (+) True XLOC_015704
TCONS_00031202 mRNA upstream 29095 36046126 ~ 36079907 (+) False XLOC_015631
TCONS_00031203 mRNA upstream 32423 36046192 ~ 36076579 (+) False XLOC_015631
TCONS_00031201 mRNA upstream 87394 36015049 ~ 36021608 (+) True XLOC_015630
TCONS_00031199 mRNA upstream 87756 36004381 ~ 36021246 (+) False XLOC_015630
TCONS_00031200 mRNA upstream 94215 36007449 ~ 36014787 (+) False XLOC_015630
TCONS_00031284 mRNA downstream 448108 36606019 ~ 36608762 (+) False XLOC_015706
TCONS_00031285 mRNA downstream 450476 36608387 ~ 36635858 (+) False XLOC_015706
TCONS_00031286 mRNA downstream 458919 36616830 ~ 36636751 (+) False XLOC_015706
TCONS_00031287 mRNA downstream 458919 36616830 ~ 36636866 (+) False XLOC_015706
TCONS_00031288 mRNA downstream 462100 36620011 ~ 36635859 (+) True XLOC_015706
TCONS_00031243 other upstream 566 36108374 ~ 36108436 (+) True XLOC_015669
TCONS_00031242 other upstream 755 36108185 ~ 36108247 (+) True XLOC_015668
TCONS_00031241 other upstream 1091 36107846 ~ 36107911 (+) True XLOC_015667
TCONS_00031240 other upstream 1365 36107575 ~ 36107637 (+) True XLOC_015666
TCONS_00031239 other upstream 1658 36107285 ~ 36107344 (+) True XLOC_015665
TCONS_00031294 other downstream 595738 36753649 ~ 36753758 (+) True XLOC_015713
TCONS_00031307 other downstream 982563 37140474 ~ 37143617 (+) True XLOC_015719
TCONS_00031312 other downstream 1034530 37192441 ~ 37201587 (+) True XLOC_015720
TCONS_00031331 other downstream 1678708 37836619 ~ 37836920 (+) False XLOC_015734
TCONS_00031335 other downstream 1716860 37874771 ~ 37878304 (+) False XLOC_015735

Expression Profile


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