Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00032448 |
| length | 989 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 8 |
| gene id | XLOC_016484 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007113.7 |
| NCBI id | CM002886.2 |
| chromosome length | 59640629 |
| location | 31599963 ~ 31664615 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006886 | intracellular protein transport | biological_process |
| GO:0030864 | cortical actin cytoskeleton | cellular_component |
| GO:0017022 | myosin binding | molecular_function |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0003779 | actin binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-070705-17 | Predicted to enable actin binding activity and myosin binding activity. Predicted to act upstream of or within intracellular protein transport. Predicted to be active in cortical actin cytoskeleton. Orthologous to human MYRIP (myosin VIIA and Rab interacting protein). |
| ensembl_id | ENSDART00000144383 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00033868 | lncRNA | downstream | 25498 | 31612853 ~ 31614748 (-) | True | XLOC_016485 |
| TCONS_00032444 | lncRNA | downstream | 26969 | 31612853 ~ 31613277 (-) | False | XLOC_016485 |
| TCONS_00033867 | lncRNA | downstream | 531299 | 31092749 ~ 31108947 (-) | True | XLOC_016480 |
| TCONS_00033866 | lncRNA | downstream | 540369 | 31092749 ~ 31099877 (-) | False | XLOC_016480 |
| TCONS_00033865 | lncRNA | downstream | 542543 | 31092749 ~ 31097703 (-) | False | XLOC_016480 |
| TCONS_00033869 | lncRNA | upstream | 220798 | 31882407 ~ 31883178 (-) | False | XLOC_016505 |
| TCONS_00032483 | lncRNA | upstream | 236059 | 31897668 ~ 31898907 (-) | True | XLOC_016508 |
| TCONS_00033870 | lncRNA | upstream | 533216 | 32194825 ~ 32201587 (-) | True | XLOC_016510 |
| TCONS_00032488 | lncRNA | upstream | 555856 | 32217465 ~ 32220224 (-) | False | XLOC_016511 |
| TCONS_00033871 | lncRNA | upstream | 555856 | 32217465 ~ 32232159 (-) | False | XLOC_016511 |
| TCONS_00032447 | mRNA | downstream | 5268 | 31627915 ~ 31634978 (-) | False | XLOC_016484 |
| TCONS_00032437 | mRNA | downstream | 25912 | 31611042 ~ 31614334 (-) | False | XLOC_016485 |
| TCONS_00032439 | mRNA | downstream | 25961 | 31612025 ~ 31614285 (-) | False | XLOC_016485 |
| TCONS_00032443 | mRNA | downstream | 25966 | 31612194 ~ 31614280 (-) | False | XLOC_016485 |
| TCONS_00032440 | mRNA | downstream | 25969 | 31612030 ~ 31614277 (-) | False | XLOC_016485 |
| TCONS_00032450 | mRNA | upstream | 15181 | 31676790 ~ 31686403 (-) | False | XLOC_016486 |
| TCONS_00032451 | mRNA | upstream | 21671 | 31683280 ~ 31686353 (-) | False | XLOC_016486 |
| TCONS_00032452 | mRNA | upstream | 24756 | 31686365 ~ 31711547 (-) | False | XLOC_016486 |
| TCONS_00032454 | mRNA | upstream | 25257 | 31686866 ~ 31711547 (-) | False | XLOC_016486 |
| TCONS_00032453 | mRNA | upstream | 25257 | 31686866 ~ 31711547 (-) | False | XLOC_016486 |
| TCONS_00032446 | other | downstream | 12459 | 31626850 ~ 31627787 (-) | False | XLOC_016484 |
| TCONS_00032442 | other | downstream | 25855 | 31612036 ~ 31614391 (-) | False | XLOC_016485 |
| TCONS_00032441 | other | downstream | 25957 | 31612034 ~ 31614289 (-) | False | XLOC_016485 |
| TCONS_00032436 | other | downstream | 28069 | 31611034 ~ 31612177 (-) | False | XLOC_016485 |
| TCONS_00032463 | other | upstream | 194633 | 31856242 ~ 31859536 (-) | True | XLOC_016491 |
| TCONS_00032464 | other | upstream | 199744 | 31861353 ~ 31861398 (-) | True | XLOC_016492 |
| TCONS_00032465 | other | upstream | 200310 | 31861919 ~ 31861973 (-) | True | XLOC_016493 |
| TCONS_00032466 | other | upstream | 200960 | 31862569 ~ 31862617 (-) | True | XLOC_016494 |
| TCONS_00032467 | other | upstream | 202108 | 31863717 ~ 31863765 (-) | True | XLOC_016495 |
