RNA id: TCONS_00033060


Basic Information

Item Value
RNA id TCONS_00033060
length 634
RNA type mRNA
GC content 0.39
exon number 2
gene id XLOC_016913
representative True

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 51520262 ~ 51521079 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATTAAattctgttaaattacagaaatgcaaATAAATTACCTACACATACTAAATCTGTGCCTTTGTATTCTTGCTTTGGCCCAGTGTGTGTCCTTGCTGCACTTATTTAAGAATACGAACAATCTGTACACCCCTCAGTCACGTGGTGCAAGACATCCAAGAGTACTTTTTCTTCCGAATGAGCAGCGAAAACAGAAGTTGACCAGATGCTGCTGTGAAAAACTGCATAACGGAAACCCAAGCAAAGACAAACACAATGGCCACAGATGGAAAAACCAAAATATTCCTCATTTCAATCGGGTTTTGGCTCATTTTCGGTGTTGAAAGCTACAGTGGTTTGGATCATGTGTTAACTATTAATCCTGGAGGATCTGTCACCATCCCATGTCATTATAATGAGGAAACTCAATGGCAGATGAAATTCTGGTTTTCAGAAATATTTCAACTTCgttcatacacaaacacaaccgAGGAGAATCTGTCAGTAATTGATCGTCCTGATCAGAGCCTCTATACTGTGACTATGAGGAACATCGAGAGCAGACAATCTGGATTTTATTACTGTGTTTTGGAGTCTGAAGGAAAAGAGAACACCACATATGAACTTTTTCTCATGGTTAAATCTGGTATGTGa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000165504

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00033965 lncRNA downstream 35938 51483547 ~ 51484324 (-) True XLOC_016909
TCONS_00033417 lncRNA downstream 43207 51473916 ~ 51477055 (-) True XLOC_016907
TCONS_00033964 lncRNA downstream 44844 51473913 ~ 51475418 (-) False XLOC_016907
TCONS_00033963 lncRNA downstream 110314 51409231 ~ 51409948 (-) True XLOC_016901
TCONS_00033416 lncRNA downstream 113136 51405600 ~ 51407126 (-) True XLOC_016900
TCONS_00033069 lncRNA upstream 216018 51737097 ~ 51749359 (-) False XLOC_016919
TCONS_00033072 lncRNA upstream 217607 51738686 ~ 51757110 (-) False XLOC_016919
TCONS_00033077 lncRNA upstream 231429 51752508 ~ 51757110 (-) False XLOC_016919
TCONS_00033966 lncRNA upstream 579911 52100990 ~ 52102594 (-) False XLOC_016925
TCONS_00033967 lncRNA upstream 579911 52100990 ~ 52103610 (-) True XLOC_016925
TCONS_00033058 mRNA downstream 7968 51509663 ~ 51512294 (-) False XLOC_016912
TCONS_00033059 mRNA downstream 8763 51509790 ~ 51511499 (-) True XLOC_016912
TCONS_00033055 mRNA downstream 12722 51493515 ~ 51507540 (-) False XLOC_016910
TCONS_00033057 mRNA downstream 12722 51502003 ~ 51507540 (-) True XLOC_016910
TCONS_00033056 mRNA downstream 19305 51499900 ~ 51500957 (-) True XLOC_016911
TCONS_00033061 mRNA upstream 71313 51592392 ~ 51593835 (-) True XLOC_016914
TCONS_00033062 mRNA upstream 89505 51610584 ~ 51611344 (-) True XLOC_016915
TCONS_00033063 mRNA upstream 92374 51613453 ~ 51630555 (-) False XLOC_016916
TCONS_00033064 mRNA upstream 93173 51614252 ~ 51634431 (-) True XLOC_016916
TCONS_00033065 mRNA upstream 119512 51640591 ~ 51644044 (-) True XLOC_016917
TCONS_00033052 other downstream 62034 51458113 ~ 51458228 (-) True XLOC_016905
TCONS_00033050 other downstream 90772 51429173 ~ 51429490 (-) True XLOC_016903
TCONS_00033049 other downstream 104451 51415503 ~ 51415811 (-) True XLOC_016902
TCONS_00033026 other downstream 810780 50709366 ~ 50709482 (-) True XLOC_016882
TCONS_00033024 other downstream 1046720 50473426 ~ 50473542 (-) True XLOC_016880
TCONS_00033068 other upstream 216018 51737097 ~ 51741713 (-) False XLOC_016919
TCONS_00033071 other upstream 217607 51738686 ~ 51748935 (-) False XLOC_016919
TCONS_00033073 other upstream 225176 51746255 ~ 51749341 (-) False XLOC_016919
TCONS_00033075 other upstream 230996 51752075 ~ 51757110 (-) False XLOC_016919
TCONS_00033076 other upstream 231429 51752508 ~ 51757110 (-) True XLOC_016919

Expression Profile

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