Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1555251 |
| length | 345 |
| lncRNA type | intronic |
| GC content | 0.32 |
| exon number | 2 |
| gene id | G1360789 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 29159033 ~ 29169741 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1555067 | lncRNA | downstream | 185744 | 28968049 ~ 28973289 (-) | True | G1360619 |
| TU1555068 | lncRNA | downstream | 261805 | 28892249 ~ 28897228 (-) | False | G1360619 |
| TU1555056 | lncRNA | downstream | 279778 | 28878997 ~ 28879255 (-) | True | G1360609 |
| TU1555048 | lncRNA | downstream | 293600 | 28864746 ~ 28865433 (-) | True | G1360601 |
| TU1555049 | lncRNA | downstream | 298639 | 28859817 ~ 28860394 (-) | True | G1360602 |
| TU1555305 | lncRNA | upstream | 60541 | 29230282 ~ 29230811 (-) | True | G1360840 |
| TU1555405 | lncRNA | upstream | 185068 | 29354809 ~ 29355026 (-) | True | G1360938 |
| TU1555415 | lncRNA | upstream | 192408 | 29362149 ~ 29362350 (-) | True | G1360948 |
| TU1555430 | lncRNA | upstream | 208151 | 29377892 ~ 29378325 (-) | True | G1360963 |
| TU1555437 | lncRNA | upstream | 213669 | 29383410 ~ 29383614 (-) | True | G1360970 |
| XR_005036500.1 | mRNA | downstream | 392031 | 28626132 ~ 28767002 (-) | True | afap1l2 |
| XM_036946702.1 | mRNA | downstream | 392032 | 28626132 ~ 28767001 (-) | False | afap1l2 |
| XM_036946700.1 | mRNA | downstream | 392033 | 28626132 ~ 28767000 (-) | False | afap1l2 |
| XM_036946701.1 | mRNA | downstream | 392033 | 28626132 ~ 28767000 (-) | False | afap1l2 |
| XM_036946703.1 | mRNA | downstream | 394418 | 28626132 ~ 28764615 (-) | False | afap1l2 |
| XR_002468900.2 | mRNA | upstream | 242729 | 29412470 ~ 29423653 (-) | False | LOC110491794 |
| XR_002468901.2 | mRNA | upstream | 242729 | 29412470 ~ 29423653 (-) | False | LOC110491794 |
| XR_002468903.2 | mRNA | upstream | 242730 | 29412471 ~ 29423653 (-) | False | LOC110491794 |
| XM_021565563.2 | mRNA | upstream | 505076 | 29674817 ~ 29702593 (-) | True | LOC110491798 |
| XR_002469089.2 | mRNA | upstream | 685436 | 29855177 ~ 29863073 (-) | False | LOC110492894 |
| TU1554186 | other | downstream | 978093 | 28177715 ~ 28180940 (-) | True | taok2b |
| TU1554168 | other | downstream | 994806 | 28163463 ~ 28164227 (-) | True | G1359763 |
| TU1553783 | other | downstream | 1630896 | 27527163 ~ 27528137 (-) | True | G1359412 |
| TU1553687 | other | downstream | 1799471 | 27357284 ~ 27359562 (-) | True | G1359321 |
| TU1553462 | other | downstream | 2045632 | 27112234 ~ 27113401 (-) | True | G1359119 |
| TU1555797 | other | upstream | 327372 | 29497113 ~ 29497555 (-) | True | G1361290 |
| TU1556170 | other | upstream | 754130 | 29923871 ~ 29925154 (-) | True | G1361619 |
| TU1558520 | other | upstream | 2469696 | 31639437 ~ 31650697 (-) | True | G1363836 |
| TU1558829 | other | upstream | 2716008 | 31885749 ~ 31886112 (-) | True | G1364105 |
| TU1559113 | other | upstream | 2849053 | 32018794 ~ 32019498 (-) | True | G1364348 |
