Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00046197 |
| length | 8188 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 48 |
| gene id | XLOC_023361 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007135.7 |
| NCBI id | CM002908.2 |
| chromosome length | 42172926 |
| location | 15114092 ~ 15263142 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0050862 | positive regulation of T cell receptor signaling pathway | biological_process |
| GO:0060369 | positive regulation of Fc receptor mediated stimulatory signaling pathway | biological_process |
| GO:0002860 | positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target | biological_process |
| GO:0001816 | cytokine production | biological_process |
| GO:0002891 | positive regulation of immunoglobulin mediated immune response | biological_process |
| GO:0033005 | positive regulation of mast cell activation | biological_process |
| GO:0032729 | positive regulation of interferon-gamma production | biological_process |
| GO:0002729 | positive regulation of natural killer cell cytokine production | biological_process |
| GO:0009897 | external side of plasma membrane | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-090609-5 | Predicted to be involved in centriole replication; centriole-centriole cohesion; and ciliary basal body organization. Predicted to act upstream of or within cilium organization. Predicted to be located in centrosome. Predicted to be active in centriole and ciliary basal body. Orthologous to human RTTN (rotatin). |
| ensembl_id | ENSDART00000183176 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00047168 | lncRNA | downstream | 98625 | 15005512 ~ 15032354 (-) | True | XLOC_023360 |
| TCONS_00047167 | lncRNA | downstream | 685843 | 14441954 ~ 14445136 (-) | True | XLOC_023356 |
| TCONS_00047166 | lncRNA | downstream | 1773327 | 13355278 ~ 13357652 (-) | True | XLOC_023352 |
| TCONS_00046181 | lncRNA | downstream | 1783462 | 13341064 ~ 13347517 (-) | True | XLOC_023351 |
| TCONS_00046176 | lncRNA | downstream | 1875947 | 13252312 ~ 13255032 (-) | False | XLOC_023350 |
| TCONS_00046849 | lncRNA | upstream | 481928 | 15745070 ~ 15749414 (-) | True | XLOC_023364 |
| TCONS_00047169 | lncRNA | upstream | 883361 | 16146503 ~ 16147518 (-) | True | XLOC_023366 |
| TCONS_00046850 | lncRNA | upstream | 941646 | 16204788 ~ 16222786 (-) | True | XLOC_023367 |
| TCONS_00047170 | lncRNA | upstream | 1861268 | 17124410 ~ 17126986 (-) | True | XLOC_023376 |
| TCONS_00047171 | lncRNA | upstream | 1970384 | 17233526 ~ 17236200 (-) | True | XLOC_023378 |
| TCONS_00046192 | mRNA | downstream | 418552 | 14623831 ~ 14712427 (-) | False | XLOC_023359 |
| TCONS_00046193 | mRNA | downstream | 419382 | 14706351 ~ 14711597 (-) | True | XLOC_023359 |
| TCONS_00046189 | mRNA | downstream | 553420 | 14559342 ~ 14577559 (-) | False | XLOC_023358 |
| TCONS_00046188 | mRNA | downstream | 553435 | 14559328 ~ 14577544 (-) | False | XLOC_023358 |
| TCONS_00046201 | mRNA | upstream | 379435 | 15642577 ~ 15648878 (-) | False | XLOC_023363 |
| TCONS_00046202 | mRNA | upstream | 382326 | 15645468 ~ 15648636 (-) | True | XLOC_023363 |
| TCONS_00046205 | mRNA | upstream | 1588071 | 16851213 ~ 16904234 (-) | False | XLOC_023369 |
| TCONS_00046206 | mRNA | upstream | 1588071 | 16851213 ~ 16904803 (-) | False | XLOC_023369 |
| TCONS_00046207 | mRNA | upstream | 1592588 | 16855730 ~ 16905018 (-) | False | XLOC_023369 |
| TCONS_00046187 | other | downstream | 594568 | 14533842 ~ 14536411 (-) | True | XLOC_023357 |
| TCONS_00046184 | other | downstream | 1521265 | 13609598 ~ 13609714 (-) | True | XLOC_023354 |
| TCONS_00046161 | other | downstream | 2974335 | 12155107 ~ 12156644 (-) | True | XLOC_023338 |
| TCONS_00046151 | other | downstream | 3719038 | 11411822 ~ 11411941 (-) | True | XLOC_023331 |
| TCONS_00046142 | other | downstream | 4082419 | 11048446 ~ 11048560 (-) | True | XLOC_023326 |
| TCONS_00046203 | other | upstream | 810947 | 16074089 ~ 16075115 (-) | True | XLOC_023365 |
| TCONS_00046204 | other | upstream | 1291727 | 16554869 ~ 16554983 (-) | True | XLOC_023368 |
| TCONS_00046210 | other | upstream | 1633666 | 16896808 ~ 16900124 (-) | False | XLOC_023369 |
| TCONS_00046216 | other | upstream | 1707962 | 16971104 ~ 16979728 (-) | True | XLOC_023371 |
| TCONS_00046223 | other | upstream | 1873607 | 17136749 ~ 17139114 (-) | True | XLOC_023377 |
