RNA id: TCONS_00048176



Basic Information


Item Value
RNA id TCONS_00048176
length 159
RNA type mRNA
GC content 0.55
exon number 7
gene id XLOC_024354
representative True

Chromosome Information


Item Value
chromosome id NC_007136.7
NCBI id CM002909.2
chromosome length 37502051
location 217686 ~ 244263 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


ATGGAGGACACACTCACAACACCAACACTCAGCAGCAGCTTTAGAAGCGAACCAGATGAGGAAataatGTCAGCAGTccgcgtgcgcgttgaggaagaggaggaggaggaagaggaggaagagcGacaggaagaggaggaggaggaggaggaggaagag

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000190224

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00049298 lncRNA downstream 51706 160873 ~ 165980 (-) True XLOC_024349
TCONS_00049297 lncRNA downstream 51816 160873 ~ 165870 (-) False XLOC_024349
TCONS_00049296 lncRNA downstream 55860 160873 ~ 161826 (-) False XLOC_024349
TCONS_00049295 lncRNA downstream 79538 137544 ~ 138148 (-) True XLOC_024348
TCONS_00049066 lncRNA upstream 28195 272458 ~ 276103 (-) True XLOC_024358
TCONS_00049067 lncRNA upstream 31868 276131 ~ 277363 (-) True XLOC_024359
TCONS_00049068 lncRNA upstream 43396 287659 ~ 291265 (-) False XLOC_024360
TCONS_00048180 lncRNA upstream 44398 288661 ~ 291347 (-) False XLOC_024360
TCONS_00048181 lncRNA upstream 44398 288661 ~ 294609 (-) True XLOC_024360
TCONS_00048175 mRNA downstream 6956 207422 ~ 210730 (-) True XLOC_024353
TCONS_00048172 mRNA downstream 10472 196313 ~ 207214 (-) True XLOC_024351
TCONS_00048174 mRNA downstream 13667 202323 ~ 204019 (-) False XLOC_024352
TCONS_00048173 mRNA downstream 13667 202323 ~ 204019 (-) True XLOC_024352
TCONS_00048171 mRNA downstream 44521 172331 ~ 173165 (-) True XLOC_024350
TCONS_00048178 mRNA upstream 10199 254462 ~ 255971 (-) True XLOC_024356
TCONS_00048179 mRNA upstream 21097 265360 ~ 269284 (-) True XLOC_024357
TCONS_00048182 mRNA upstream 70345 314608 ~ 348784 (-) True XLOC_024362
TCONS_00048183 mRNA upstream 126901 371164 ~ 375882 (-) True XLOC_024364
TCONS_00048184 mRNA upstream 206080 450343 ~ 492549 (-) True XLOC_024365
TCONS_00048188 other upstream 244558 488821 ~ 490785 (-) True XLOC_024368
TCONS_00048212 other upstream 1385392 1629655 ~ 1629749 (-) True XLOC_024382
TCONS_00048237 other upstream 2771907 3016170 ~ 3034668 (-) False XLOC_024397
TCONS_00048288 other upstream 4081353 4325616 ~ 4325731 (-) True XLOC_024429
TCONS_00048296 other upstream 4646504 4890767 ~ 4904432 (-) True XLOC_024434