Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00049517 |
| length | 1184 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 2 |
| gene id | XLOC_024966 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007114.7 |
| NCBI id | CM002887.2 |
| chromosome length | 62628489 |
| location | 1942219 ~ 1943632 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005525 | GTP binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-070615-30 | Predicted to enable GTP binding activity. Predicted to be located in membrane. Predicted to be integral component of membrane. |
| ensembl_id | ENSDART00000114520 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00052530 | lncRNA | upstream | 129956 | 1811391 ~ 1812263 (+) | True | XLOC_024965 |
| TCONS_00052305 | lncRNA | upstream | 309001 | 1631812 ~ 1633218 (+) | True | XLOC_024958 |
| TCONS_00052304 | lncRNA | upstream | 310415 | 1630577 ~ 1631804 (+) | True | XLOC_024957 |
| TCONS_00052529 | lncRNA | upstream | 344241 | 1576753 ~ 1597978 (+) | False | XLOC_024955 |
| TCONS_00052531 | lncRNA | downstream | 198997 | 2142629 ~ 2143945 (+) | False | XLOC_024967 |
| TCONS_00052532 | lncRNA | downstream | 199274 | 2142906 ~ 2143945 (+) | True | XLOC_024967 |
| TCONS_00052533 | lncRNA | downstream | 529788 | 2473420 ~ 2476560 (+) | False | XLOC_024968 |
| TCONS_00052534 | lncRNA | downstream | 529795 | 2473427 ~ 3166194 (+) | False | XLOC_024968 |
| TCONS_00052535 | lncRNA | downstream | 529800 | 2473432 ~ 3166194 (+) | True | XLOC_024968 |
| TCONS_00049513 | mRNA | upstream | 180239 | 1749793 ~ 1761980 (+) | True | XLOC_024963 |
| TCONS_00049512 | mRNA | upstream | 204629 | 1735214 ~ 1737590 (+) | True | XLOC_024962 |
| TCONS_00049511 | mRNA | upstream | 212406 | 1724941 ~ 1729813 (+) | True | XLOC_024961 |
| TCONS_00049510 | mRNA | upstream | 227604 | 1698430 ~ 1714615 (+) | True | XLOC_024960 |
| TCONS_00049509 | mRNA | upstream | 237810 | 1689220 ~ 1704409 (+) | False | XLOC_024960 |
| TCONS_00049518 | mRNA | downstream | 726181 | 2669813 ~ 2673643 (+) | True | XLOC_024971 |
| TCONS_00049519 | mRNA | downstream | 775611 | 2719243 ~ 2894449 (+) | False | XLOC_024972 |
| TCONS_00049520 | mRNA | downstream | 811253 | 2754885 ~ 2757607 (+) | True | XLOC_024973 |
| TCONS_00049521 | mRNA | downstream | 942591 | 2886223 ~ 2894449 (+) | True | XLOC_024972 |
| TCONS_00049522 | mRNA | downstream | 1015711 | 2959343 ~ 2961987 (+) | False | XLOC_024974 |
| TCONS_00049514 | other | upstream | 137737 | 1782815 ~ 1804482 (+) | False | XLOC_024964 |
| TCONS_00049515 | other | upstream | 137737 | 1783192 ~ 1804482 (+) | False | XLOC_024964 |
| TCONS_00049516 | other | upstream | 138874 | 1788195 ~ 1803345 (+) | True | XLOC_024964 |
| TCONS_00049502 | other | upstream | 260129 | 1556853 ~ 1682090 (+) | True | XLOC_024954 |
| TCONS_00049505 | other | upstream | 353618 | 1586054 ~ 1588601 (+) | True | XLOC_024955 |
| TCONS_00049552 | other | downstream | 2325722 | 4269354 ~ 4270546 (+) | True | XLOC_025004 |
| TCONS_00049569 | other | downstream | 4094571 | 6038203 ~ 6038338 (+) | True | XLOC_025028 |
| TCONS_00049575 | other | downstream | 4417249 | 6360881 ~ 6370802 (+) | True | XLOC_025032 |
| TCONS_00049594 | other | downstream | 6445923 | 8389555 ~ 8389671 (+) | True | XLOC_025061 |
| TCONS_00049598 | other | downstream | 7084862 | 9028494 ~ 9028642 (+) | True | XLOC_025069 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01102534_00000458_00001191.mRNA | True | 964 | mRNA | 0.42 | 1 | CI01102534 | 228 ~ 1191 (-) |
