Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00050437 |
| length | 1417 |
| lncRNA type | read_through |
| GC content | 0.44 |
| exon number | 2 |
| gene id | XLOC_025606 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007114.7 |
| NCBI id | CM002887.2 |
| chromosome length | 62628489 |
| location | 39626833 ~ 39632214 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0010921 | regulation of phosphatase activity | biological_process |
| GO:0009451 | RNA modification | biological_process |
| GO:0051340 | regulation of ligase activity | biological_process |
| GO:0051351 | positive regulation of ligase activity | biological_process |
| GO:0098536 | deuterosome | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00052746 | lncRNA | upstream | 2908 | 39618568 ~ 39623925 (+) | True | XLOC_025605 |
| TCONS_00050429 | lncRNA | upstream | 62334 | 39555762 ~ 39564499 (+) | True | XLOC_025601 |
| TCONS_00050424 | lncRNA | upstream | 362316 | 39258810 ~ 39264517 (+) | False | XLOC_025599 |
| TCONS_00050451 | lncRNA | downstream | 531922 | 40164136 ~ 40166202 (+) | True | XLOC_025611 |
| TCONS_00052365 | lncRNA | downstream | 719459 | 40351673 ~ 40352408 (+) | True | XLOC_025618 |
| TCONS_00052747 | lncRNA | downstream | 771955 | 40404169 ~ 40404939 (+) | True | XLOC_025619 |
| TCONS_00052748 | lncRNA | downstream | 1266410 | 40898624 ~ 40902157 (+) | False | XLOC_025627 |
| TCONS_00052749 | lncRNA | downstream | 1267010 | 40899224 ~ 40902157 (+) | False | XLOC_025627 |
| TCONS_00050435 | mRNA | upstream | 13607 | 39600590 ~ 39613226 (+) | False | XLOC_025604 |
| TCONS_00050434 | mRNA | upstream | 18963 | 39600562 ~ 39607870 (+) | False | XLOC_025604 |
| TCONS_00050433 | mRNA | upstream | 27494 | 39579393 ~ 39599339 (+) | True | XLOC_025603 |
| TCONS_00050431 | mRNA | upstream | 49781 | 39568290 ~ 39577052 (+) | False | XLOC_025602 |
| TCONS_00050430 | mRNA | upstream | 50170 | 39566999 ~ 39576663 (+) | False | XLOC_025602 |
| TCONS_00050438 | mRNA | downstream | 23974 | 39656188 ~ 39679707 (+) | False | XLOC_025607 |
| TCONS_00050439 | mRNA | downstream | 24035 | 39656249 ~ 39690218 (+) | False | XLOC_025607 |
| TCONS_00050442 | mRNA | downstream | 31773 | 39663987 ~ 39685977 (+) | False | XLOC_025607 |
| TCONS_00050441 | mRNA | downstream | 31773 | 39663987 ~ 39685977 (+) | False | XLOC_025607 |
| TCONS_00050440 | mRNA | downstream | 31773 | 39663987 ~ 39685977 (+) | False | XLOC_025607 |
| TCONS_00050436 | other | upstream | 20356 | 39600624 ~ 39606477 (+) | True | XLOC_025604 |
| TCONS_00050432 | other | upstream | 55978 | 39568488 ~ 39570855 (+) | True | XLOC_025602 |
| TCONS_00050423 | other | upstream | 443971 | 39182746 ~ 39182862 (+) | True | XLOC_025598 |
| TCONS_00050415 | other | upstream | 1837888 | 37788861 ~ 37788945 (+) | True | XLOC_025591 |
| TCONS_00050414 | other | upstream | 1838273 | 37788476 ~ 37788560 (+) | True | XLOC_025590 |
| TCONS_00050446 | other | downstream | 252605 | 39884819 ~ 39884956 (+) | True | XLOC_025609 |
| TCONS_00050449 | other | downstream | 530185 | 40162399 ~ 40168381 (+) | False | XLOC_025611 |
| TCONS_00050463 | other | downstream | 1159506 | 40791720 ~ 40794879 (+) | False | XLOC_025623 |
| TCONS_00050464 | other | downstream | 1159532 | 40791746 ~ 40792877 (+) | False | XLOC_025623 |
| TCONS_00050465 | other | downstream | 1159532 | 40791746 ~ 40792988 (+) | False | XLOC_025623 |
