Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00050500 |
| length | 664 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 6 |
| gene id | XLOC_025650 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007114.7 |
| NCBI id | CM002887.2 |
| chromosome length | 62628489 |
| location | 43373867 ~ 43397134 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0005575 | cellular_component | cellular_component |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0008270 | zinc ion binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-040426-1596 | Predicted to enable zinc ion binding activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process and protein targeting to ER. Predicted to be active in endoplasmic reticulum. Orthologous to several human genes including ZFAND2B (zinc finger AN1-type containing 2B). |
| ensembl_id | ENSDART00000172425 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00052759 | lncRNA | upstream | 45159 | 43200317 ~ 43328759 (+) | False | XLOC_025649 |
| TCONS_00052368 | lncRNA | upstream | 158862 | 43200616 ~ 43215056 (+) | True | XLOC_025649 |
| TCONS_00052758 | lncRNA | upstream | 171168 | 43200317 ~ 43202750 (+) | False | XLOC_025649 |
| TCONS_00050497 | lncRNA | upstream | 238425 | 43102010 ~ 43135493 (+) | False | XLOC_025648 |
| TCONS_00052757 | lncRNA | upstream | 618750 | 42754657 ~ 42755168 (+) | True | XLOC_025643 |
| TCONS_00050504 | lncRNA | downstream | 269233 | 43650041 ~ 43653791 (+) | True | XLOC_025652 |
| TCONS_00052760 | lncRNA | downstream | 304856 | 43685664 ~ 43687657 (+) | False | XLOC_025653 |
| TCONS_00052761 | lncRNA | downstream | 305426 | 43686234 ~ 43687657 (+) | True | XLOC_025653 |
| TCONS_00050505 | lncRNA | downstream | 330259 | 43711067 ~ 43755843 (+) | False | XLOC_025654 |
| TCONS_00052762 | lncRNA | downstream | 331061 | 43711869 ~ 43755843 (+) | False | XLOC_025654 |
| TCONS_00050496 | mRNA | upstream | 238425 | 43102010 ~ 43135493 (+) | True | XLOC_025648 |
| TCONS_00050495 | mRNA | upstream | 281656 | 43086548 ~ 43092262 (+) | True | XLOC_025647 |
| TCONS_00050493 | mRNA | upstream | 312947 | 42999277 ~ 43060971 (+) | False | XLOC_025646 |
| TCONS_00050494 | mRNA | upstream | 313118 | 42999844 ~ 43060800 (+) | True | XLOC_025646 |
| TCONS_00050492 | mRNA | upstream | 416309 | 42923275 ~ 42957609 (+) | True | XLOC_025645 |
| TCONS_00050502 | mRNA | downstream | 79888 | 43460696 ~ 43475780 (+) | False | XLOC_025651 |
| TCONS_00050503 | mRNA | downstream | 86787 | 43467595 ~ 43479049 (+) | True | XLOC_025651 |
| TCONS_00050508 | mRNA | downstream | 393561 | 43774369 ~ 43808322 (+) | True | XLOC_025657 |
| TCONS_00050509 | mRNA | downstream | 444977 | 43825785 ~ 43831030 (+) | False | XLOC_025658 |
| TCONS_00050510 | mRNA | downstream | 445210 | 43826018 ~ 43829729 (+) | False | XLOC_025658 |
| TCONS_00050475 | other | upstream | 1873393 | 41500409 ~ 41500525 (+) | True | XLOC_025630 |
| TCONS_00050468 | other | upstream | 2579039 | 40792230 ~ 40794879 (+) | True | XLOC_025623 |
| TCONS_00050467 | other | upstream | 2579078 | 40791746 ~ 40794840 (+) | False | XLOC_025623 |
| TCONS_00050466 | other | upstream | 2580366 | 40791746 ~ 40793552 (+) | False | XLOC_025623 |
| TCONS_00050465 | other | upstream | 2580930 | 40791746 ~ 40792988 (+) | False | XLOC_025623 |
| TCONS_00050506 | other | downstream | 333891 | 43714699 ~ 43714783 (+) | True | XLOC_025655 |
| TCONS_00050507 | other | downstream | 336019 | 43716827 ~ 43716915 (+) | True | XLOC_025656 |
| TCONS_00050515 | other | downstream | 1507229 | 44888037 ~ 44888153 (+) | True | XLOC_025662 |
| TCONS_00050528 | other | downstream | 2254269 | 45635077 ~ 45635186 (+) | True | XLOC_025668 |
| TCONS_00050561 | other | downstream | 4079680 | 47460488 ~ 47460603 (+) | True | XLOC_025690 |
