RNA id: TU2074989



Basic Information


Item Value
RNA id TU2074989
length 264
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G1813759
representative True

Chromosome Information


Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 44689328 ~ 44689591 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CCCAATAATCTACGGTGTCCATGGTTACTCTGGAAGAGTATCACATGCCCAATGTGACCCAATAATCTACGGTGTCCATGGTTACTCTGGAAGAGTATCACATGCCCAATGTGACCCAATAATCTACGGTGTCCATGGTTACTCCGGAAGAGTATCACATGCCCAATGTGACCCAATAATCTACGGTGTCCATGGTTACTCCGGAAGAGTATCACATGCCCAATGTGACCCAATAATCTACGGTGTCCATGGTTACTCCGGAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2074984 lncRNA upstream 9496 44679535 ~ 44679832 (+) True G1813754
TU2074982 lncRNA upstream 13161 44675947 ~ 44676167 (+) True G1813752
TU2074979 lncRNA upstream 28830 44660088 ~ 44660498 (+) True G1813749
TU2074917 lncRNA upstream 147648 44541015 ~ 44541680 (+) True G1813695
TU2074900 lncRNA upstream 168739 44520062 ~ 44520589 (+) True G1813679
TU2075838 lncRNA downstream 21523 44711114 ~ 44711318 (+) True G1814493
TU2075849 lncRNA downstream 34914 44724505 ~ 44724877 (+) True G1814504
TU2075865 lncRNA downstream 53188 44742779 ~ 44743957 (+) True G1814519
TU2075882 lncRNA downstream 67862 44757453 ~ 44758725 (+) True G1814536
TU2075895 lncRNA downstream 77190 44766781 ~ 44767025 (+) True G1814548
XM_021579795.2 mRNA upstream 30759 44647142 ~ 44658569 (+) False LOC110501922
XM_036959401.1 mRNA upstream 30759 44647146 ~ 44658569 (+) False LOC110501922
XM_036959402.1 mRNA upstream 30759 44654045 ~ 44658569 (+) True LOC110501922
XM_021579792.2 mRNA upstream 115410 44566863 ~ 44573918 (+) False LOC110501918
XM_021579789.2 mRNA upstream 216460 44468192 ~ 44472868 (+) True LOC110501916
XM_021580002.2 mRNA downstream 294320 44983911 ~ 44987844 (+) True LOC110502137
XM_036959408.1 mRNA downstream 320156 45009747 ~ 45022170 (+) False LOC110501931
XM_036959409.1 mRNA downstream 320156 45009747 ~ 45022170 (+) False LOC110501931
XM_021579820.2 mRNA downstream 483300 45172891 ~ 45175477 (+) False LOC110501942
XM_021579822.2 mRNA downstream 483402 45172993 ~ 45175477 (+) False LOC110501942
TU2074893 other upstream 115407 44566888 ~ 44573921 (+) True LOC110501918
TU2074885 other upstream 181277 44498457 ~ 44508051 (+) True G1813665
TU2074792 other upstream 317405 44362661 ~ 44371923 (+) True G1813588
TU2074675 other upstream 369217 44318158 ~ 44320111 (+) True LOC110502169
TU2074609 other upstream 578461 44109320 ~ 44110867 (+) True G1813442
TU2076178 other downstream 420956 45110547 ~ 45111229 (+) True G1814811
TU2076159 other downstream 483384 45172975 ~ 45175472 (+) True LOC110501942
TU2076385 other downstream 832329 45521920 ~ 45527440 (+) True LOC110502177
TU2076542 other downstream 1035556 45725147 ~ 45726328 (+) True G1815113
TU2076572 other downstream 1091908 45781499 ~ 45782536 (+) True G1815137

Expression Profile