RNA id: TU2075849



Basic Information


Item Value
RNA id TU2075849
length 373
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G1814504
representative True

Chromosome Information


Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 44724505 ~ 44724877 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ACTCTGGATGGTGTGGTATGAATGGTTCCCTATCACTCTGGAATGTGTTGGTTGAATGCTTCCCTATCACTCTGGATGGTGTGGGATGAATGGTTCCCTATCACTCTGGATGGTGTGGGATGAATGGTTCCCTATCACTCTGGATGGTGTGGGATGAATGGTTCCCTATCACTCTGGATGGTTCGGGATGAATGGTTCCCTATCACTCTGGATGGTTCGGGATGAATGGTTCGCTATCACTCTGGATGGTTCGGGATGAATGGTTCGCTATCACTCTGGATGGTTCGGGATGAATGGTTCCCTATCACTCTGGATGGTTCGGGATGAATGGTTCCCTATCACTCTGGATGGTGTGGGATGAATGGTTCCCTAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2075838 lncRNA upstream 13187 44711114 ~ 44711318 (+) True G1814493
TU2074989 lncRNA upstream 34914 44689328 ~ 44689591 (+) True G1813759
TU2074984 lncRNA upstream 44673 44679535 ~ 44679832 (+) True G1813754
TU2074982 lncRNA upstream 48338 44675947 ~ 44676167 (+) True G1813752
TU2074979 lncRNA upstream 64007 44660088 ~ 44660498 (+) True G1813749
TU2075865 lncRNA downstream 17902 44742779 ~ 44743957 (+) True G1814519
TU2075882 lncRNA downstream 32576 44757453 ~ 44758725 (+) True G1814536
TU2075895 lncRNA downstream 41904 44766781 ~ 44767025 (+) True G1814548
TU2075898 lncRNA downstream 43075 44767952 ~ 44768227 (+) True G1814551
TU2075901 lncRNA downstream 45734 44770611 ~ 44770895 (+) True G1814554
XM_021579795.2 mRNA upstream 65936 44647142 ~ 44658569 (+) False LOC110501922
XM_036959401.1 mRNA upstream 65936 44647146 ~ 44658569 (+) False LOC110501922
XM_036959402.1 mRNA upstream 65936 44654045 ~ 44658569 (+) True LOC110501922
XM_021579792.2 mRNA upstream 150587 44566863 ~ 44573918 (+) False LOC110501918
XM_021579789.2 mRNA upstream 251637 44468192 ~ 44472868 (+) True LOC110501916
XM_021580002.2 mRNA downstream 259034 44983911 ~ 44987844 (+) True LOC110502137
XM_036959408.1 mRNA downstream 284870 45009747 ~ 45022170 (+) False LOC110501931
XM_036959409.1 mRNA downstream 284870 45009747 ~ 45022170 (+) False LOC110501931
XM_021579820.2 mRNA downstream 448014 45172891 ~ 45175477 (+) False LOC110501942
XM_021579822.2 mRNA downstream 448116 45172993 ~ 45175477 (+) False LOC110501942
TU2074893 other upstream 150584 44566888 ~ 44573921 (+) True LOC110501918
TU2074885 other upstream 216454 44498457 ~ 44508051 (+) True G1813665
TU2074792 other upstream 352582 44362661 ~ 44371923 (+) True G1813588
TU2074675 other upstream 404394 44318158 ~ 44320111 (+) True LOC110502169
TU2074609 other upstream 613638 44109320 ~ 44110867 (+) True G1813442
TU2076178 other downstream 385670 45110547 ~ 45111229 (+) True G1814811
TU2076159 other downstream 448098 45172975 ~ 45175472 (+) True LOC110501942
TU2076385 other downstream 797043 45521920 ~ 45527440 (+) True LOC110502177
TU2076542 other downstream 1000270 45725147 ~ 45726328 (+) True G1815113
TU2076572 other downstream 1056622 45781499 ~ 45782536 (+) True G1815137

Expression Profile