RNA id: TCONS_00005092


Basic Information

Item Value
RNA id TCONS_00005092
length 115
RNA type rRNA
GC content 0.53
exon number 1
gene id XLOC_002744
representative True

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 22271789 ~ 22271903 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

atcggcagctagctctctgcaactctcaaatGGTCGCcgactgaagctaagcagggctgtgcctggtcagtacctgaatgggagaccaaatgggaaagctaggttgctgctgtaA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000181398

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00005078 lncRNA downstream 364479 21886484 ~ 21907310 (-) False XLOC_002733
TCONS_00006038 lncRNA downstream 364653 21895919 ~ 21907136 (-) True XLOC_002733
TCONS_00006037 lncRNA downstream 427926 21646154 ~ 21843863 (-) False XLOC_002732
TCONS_00005075 lncRNA downstream 428062 21814475 ~ 21843727 (-) True XLOC_002732
TCONS_00006036 lncRNA downstream 449835 21646154 ~ 21821954 (-) False XLOC_002732
TCONS_00005093 lncRNA upstream 209255 22481158 ~ 22491458 (-) False XLOC_002745
TCONS_00006039 lncRNA upstream 258882 22530785 ~ 22534924 (-) True XLOC_002748
TCONS_00006040 lncRNA upstream 282446 22554349 ~ 22567208 (-) True XLOC_002749
TCONS_00006041 lncRNA upstream 332370 22604273 ~ 22607715 (-) True XLOC_002750
TCONS_00006042 lncRNA upstream 635494 22907397 ~ 22911674 (-) True XLOC_002756
TCONS_00005091 mRNA downstream 22345 22161585 ~ 22249444 (-) True XLOC_002743
TCONS_00005090 mRNA downstream 121370 22144768 ~ 22150419 (-) True XLOC_002742
TCONS_00005089 mRNA downstream 143847 22123831 ~ 22127942 (-) True XLOC_002741
TCONS_00005088 mRNA downstream 154668 22110842 ~ 22117121 (-) True XLOC_002740
TCONS_00005087 mRNA downstream 165458 22097328 ~ 22106331 (-) True XLOC_002739
TCONS_00005094 mRNA upstream 212437 22484340 ~ 22491353 (-) True XLOC_002745
TCONS_00005095 mRNA upstream 222923 22494826 ~ 22497980 (-) True XLOC_002746
TCONS_00005096 mRNA upstream 229860 22501763 ~ 22506044 (-) True XLOC_002747
TCONS_00005098 mRNA upstream 517416 22789319 ~ 22803854 (-) False XLOC_002752
TCONS_00005099 mRNA upstream 517430 22789333 ~ 22803740 (-) False XLOC_002752
TCONS_00005077 other downstream 364684 21863066 ~ 21907105 (-) False XLOC_002733
TCONS_00005073 other downstream 698383 21570361 ~ 21573406 (-) False XLOC_002730
TCONS_00005070 other downstream 727272 21543901 ~ 21544517 (-) True XLOC_002729
TCONS_00005063 other downstream 1228381 21040657 ~ 21043408 (-) True XLOC_002726
TCONS_00005060 other downstream 1363233 20908442 ~ 20908556 (-) True XLOC_002725
TCONS_00005097 other upstream 480329 22752232 ~ 22752348 (-) True XLOC_002751
TCONS_00005104 other upstream 556463 22828366 ~ 22831429 (-) True XLOC_002753
TCONS_00005129 other upstream 2105514 24377417 ~ 24379776 (-) True XLOC_002767
TCONS_00005130 other upstream 2111363 24383266 ~ 24383381 (-) True XLOC_002768
TCONS_00005133 other upstream 2183713 24455616 ~ 24455732 (-) True XLOC_002771