RNA id: TCONS_00005130


Basic Information

Item Value
RNA id TCONS_00005130
length 116
RNA type rRNA
GC content 0.51
exon number 1
gene id XLOC_002768
representative True

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 24383266 ~ 24383381 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

tcCACAGCCATATAAccttgcagcccaagaccagttactcactgaagagaagcagggctgagcctggtcagtacctggatgggaaaccacatggtAAAAGTAggctgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000177648

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00006046 lncRNA downstream 334061 23780542 ~ 24049205 (-) False XLOC_002764
TCONS_00005117 lncRNA downstream 334071 24046207 ~ 24049195 (-) True XLOC_002764
TCONS_00005116 lncRNA downstream 334143 23933778 ~ 24049123 (-) False XLOC_002764
TCONS_00006045 lncRNA downstream 833384 23548976 ~ 23549882 (-) True XLOC_002763
TCONS_00006044 lncRNA downstream 863023 23518061 ~ 23520243 (-) True XLOC_002762
TCONS_00005132 lncRNA upstream 56239 24439620 ~ 24445992 (-) True XLOC_002770
TCONS_00006047 lncRNA upstream 230592 24613973 ~ 24627438 (-) True XLOC_002772
TCONS_00005145 lncRNA upstream 369303 24752684 ~ 24759574 (-) True XLOC_002776
TCONS_00005759 lncRNA upstream 450315 24833696 ~ 24835335 (-) False XLOC_002779
TCONS_00006048 lncRNA upstream 450993 24834374 ~ 24852525 (-) True XLOC_002779
TCONS_00005122 mRNA downstream 11954 24323751 ~ 24371312 (-) False XLOC_002766
TCONS_00005124 mRNA downstream 20491 24325600 ~ 24362775 (-) True XLOC_002766
TCONS_00005123 mRNA downstream 39759 24325600 ~ 24343507 (-) False XLOC_002766
TCONS_00005121 mRNA downstream 63740 24304534 ~ 24319526 (-) True XLOC_002765
TCONS_00005120 mRNA downstream 64728 24302433 ~ 24318538 (-) False XLOC_002765
TCONS_00005131 mRNA upstream 10642 24394023 ~ 24416471 (-) True XLOC_002769
TCONS_00005134 mRNA upstream 257848 24641229 ~ 24648231 (-) False XLOC_002773
TCONS_00005135 mRNA upstream 258104 24641485 ~ 24648228 (-) True XLOC_002773
TCONS_00005137 mRNA upstream 265522 24648903 ~ 24659345 (-) False XLOC_002774
TCONS_00005136 mRNA upstream 265522 24648903 ~ 24659345 (-) False XLOC_002774
TCONS_00005129 other downstream 3490 24377417 ~ 24379776 (-) True XLOC_002767
TCONS_00005104 other downstream 1551837 22828366 ~ 22831429 (-) True XLOC_002753
TCONS_00005097 other downstream 1630918 22752232 ~ 22752348 (-) True XLOC_002751
TCONS_00005092 other downstream 2111363 22271789 ~ 22271903 (-) True XLOC_002744
TCONS_00005077 other downstream 2476161 21863066 ~ 21907105 (-) False XLOC_002733
TCONS_00005133 other upstream 72235 24455616 ~ 24455732 (-) True XLOC_002771
TCONS_00005164 other upstream 1110792 25494173 ~ 25499474 (-) True XLOC_002790
TCONS_00005183 other upstream 1749088 26132469 ~ 26141081 (-) False XLOC_002799
TCONS_00005187 other upstream 1812903 26196284 ~ 26202523 (-) False XLOC_002800
TCONS_00005203 other upstream 2360215 26743596 ~ 26744131 (-) True XLOC_002804

Expression Profile

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