Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2380384 |
| length | 1199 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 3 |
| gene id | G2081792 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 39682685 ~ 39693506 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2380390 | lncRNA | upstream | 310 | 39686835 ~ 39687748 (+) | True | G2081794 |
| TU2380370 | lncRNA | upstream | 30915 | 39656847 ~ 39657143 (+) | True | G2081783 |
| TU2380369 | lncRNA | upstream | 31681 | 39656178 ~ 39656377 (+) | True | G2081782 |
| TU2380367 | lncRNA | upstream | 33554 | 39653485 ~ 39654504 (+) | True | G2081781 |
| TU2380358 | lncRNA | upstream | 48932 | 39638775 ~ 39639126 (+) | True | G2081772 |
| TU2380394 | lncRNA | downstream | 7964 | 39701470 ~ 39701755 (+) | True | G2081796 |
| TU2380395 | lncRNA | downstream | 9953 | 39703459 ~ 39703984 (+) | True | G2081797 |
| TU2380398 | lncRNA | downstream | 15935 | 39709441 ~ 39709756 (+) | True | G2081800 |
| TU2380415 | lncRNA | downstream | 32412 | 39725918 ~ 39728025 (+) | True | G2081813 |
| TU2380467 | lncRNA | downstream | 82656 | 39776162 ~ 39806327 (+) | False | G2081845 |
| XM_036965220.1 | mRNA | upstream | 6498 | 39667989 ~ 39681560 (+) | False | LOC110508028 |
| XM_036965219.1 | mRNA | upstream | 7926 | 39668004 ~ 39680132 (+) | True | LOC110508028 |
| XR_005040116.1 | mRNA | upstream | 648433 | 39039573 ~ 39039625 (+) | True | LOC118944799 |
| XM_021588440.2 | mRNA | upstream | 1059888 | 38619550 ~ 38628170 (+) | True | LOC110508002 |
| LOC110507217 | mRNA | upstream | 1213459 | 38469918 ~ 38474599 (+) | True | LOC110507217 |
| XM_036964981.1 | mRNA | downstream | 1055 | 39694561 ~ 39701212 (+) | True | LOC110507222 |
| XM_036965017.1 | mRNA | downstream | 87683 | 39781189 ~ 39938079 (+) | False | LOC110507223 |
| XM_021586905.2 | mRNA | downstream | 601325 | 40294831 ~ 40297552 (+) | False | ssr3 |
| NM_001160569.1 | mRNA | downstream | 601334 | 40294840 ~ 40297545 (+) | True | ssr3 |
| XM_036965107.1 | mRNA | downstream | 967740 | 40661246 ~ 40670079 (+) | False | LOC110508037 |
| TU2378436 | other | upstream | 1742907 | 37944932 ~ 37945151 (+) | True | G2080014 |
| TU2377942 | other | upstream | 1868772 | 37815878 ~ 37819286 (+) | False | G2079657 |
| TU2377944 | other | upstream | 1868772 | 37815878 ~ 37819286 (+) | True | G2079657 |
| TU2377712 | other | upstream | 2319922 | 37366739 ~ 37368136 (+) | True | G2079468 |
| TU2377335 | other | upstream | 2407226 | 37279105 ~ 37280832 (+) | True | G2079197 |
| TU2380510 | other | downstream | 134152 | 39827658 ~ 39837383 (+) | True | G2081884 |
| TU2380477 | other | downstream | 202161 | 39895667 ~ 39913078 (+) | False | LOC110507223 |
| TU2380578 | other | downstream | 238368 | 39931874 ~ 39933835 (+) | True | G2081949 |
| TU2380828 | other | downstream | 263709 | 39957215 ~ 39957751 (+) | True | G2082162 |
| TU2381755 | other | downstream | 1150008 | 40843514 ~ 40844780 (+) | False | LOC110508042 |
