Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036969397.1 |
| length | 1231 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 4 |
| gene id | LOC110521615 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 25938771 ~ 25942364 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006955 | immune response | biological_process |
| GO:0005615 | extracellular space | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0005125 | cytokine activity | molecular_function |
| GO:0005164 | tumor necrosis factor receptor binding | molecular_function |
| id | description |
|---|---|
| K04389 | TNFSF6, FASL, CD178; tumor necrosis factor ligand superfamily member 6 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2535905 | lncRNA | downstream | 28697 | 25909761 ~ 25910074 (-) | True | G2217037 |
| TU2535903 | lncRNA | downstream | 29354 | 25908995 ~ 25909417 (-) | True | G2217035 |
| TU2535872 | lncRNA | downstream | 67725 | 25870811 ~ 25871046 (-) | True | G2217011 |
| TU2535871 | lncRNA | downstream | 68045 | 25870476 ~ 25870726 (-) | True | G2217010 |
| TU2535868 | lncRNA | downstream | 70586 | 25867875 ~ 25868185 (-) | True | G2217007 |
| TU2536622 | lncRNA | upstream | 115699 | 26058063 ~ 26058451 (-) | True | G2217694 |
| TU2536648 | lncRNA | upstream | 205741 | 26148105 ~ 26152511 (-) | True | G2217720 |
| TU2536695 | lncRNA | upstream | 238008 | 26180372 ~ 26234465 (-) | True | G2217763 |
| TU2536726 | lncRNA | upstream | 279061 | 26221425 ~ 26283767 (-) | False | G2217789 |
| TU2536728 | lncRNA | upstream | 279061 | 26221425 ~ 26283722 (-) | True | G2217789 |
| XM_021599292.2 | mRNA | downstream | 133119 | 25779306 ~ 25805652 (-) | True | LOC110521612 |
| XM_021599293.2 | mRNA | downstream | 133689 | 25779306 ~ 25805082 (-) | False | LOC110521612 |
| XM_021599284.2 | mRNA | downstream | 255716 | 25656346 ~ 25683055 (-) | False | LOC110521609 |
| XM_021599297.2 | mRNA | upstream | 29404 | 25971768 ~ 25973905 (-) | False | LOC110521616 |
| XM_021599298.2 | mRNA | upstream | 29404 | 25971768 ~ 25973913 (-) | True | LOC110521616 |
| NM_001165132.2 | mRNA | upstream | 185172 | 26127536 ~ 26132937 (-) | True | LOC100305228 |
| NM_001160547.2 | mRNA | upstream | 365222 | 26307586 ~ 26312047 (-) | True | itpa |
| XM_021599310.2 | mRNA | upstream | 424524 | 26366888 ~ 26370050 (-) | True | pigc |
| TU2536522 | other | downstream | 18526 | 25917354 ~ 25920245 (-) | False | G2217605 |
| TU2536525 | other | downstream | 18894 | 25917354 ~ 25919877 (-) | True | G2217605 |
| TU2532260 | other | downstream | 2739365 | 23197647 ~ 23199406 (-) | False | G2213647 |
| TU2532275 | other | downstream | 2759160 | 23178506 ~ 23179611 (-) | True | G2213654 |
| TU2532098 | other | downstream | 2937523 | 22986359 ~ 23001248 (-) | True | LOC110521564 |
| TU2536746 | other | upstream | 294321 | 26236685 ~ 26237398 (-) | True | G2217805 |
| TU2536765 | other | upstream | 325982 | 26268346 ~ 26341495 (-) | True | G2217824 |
| TU2537095 | other | upstream | 946525 | 26888889 ~ 26890611 (-) | True | G2218118 |
| TU2537466 | other | upstream | 1230889 | 27173253 ~ 27180388 (-) | True | LOC110521640 |
| TU2538742 | other | upstream | 1902510 | 27844874 ~ 27845401 (-) | True | G2219594 |
