Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00061734 |
| length | 781 |
| lncRNA type | sense_over |
| GC content | 0.43 |
| exon number | 6 |
| gene id | XLOC_030218 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007116.7 |
| NCBI id | CM002889.2 |
| chromosome length | 72500376 |
| location | 33281105 ~ 33283718 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0021522 | spinal cord motor neuron differentiation | biological_process |
| GO:0048568 | embryonic organ development | biological_process |
| GO:0005743 | mitochondrial inner membrane | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0005739 | mitochondrion | cellular_component |
| GO:0004129 | cytochrome-c oxidase activity | molecular_function |
| id | description |
|---|---|
| ko03029 | Mitochondrial biogenesis |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00059086 | lncRNA | upstream | 348395 | 32928834 ~ 32932768 (+) | False | XLOC_030215 |
| TCONS_00059079 | lncRNA | upstream | 394755 | 32883593 ~ 32886408 (+) | False | XLOC_030211 |
| TCONS_00059076 | lncRNA | upstream | 395092 | 32882700 ~ 32886071 (+) | False | XLOC_030211 |
| TCONS_00059073 | lncRNA | upstream | 425067 | 32850839 ~ 32856096 (+) | False | XLOC_030210 |
| TCONS_00061733 | lncRNA | upstream | 913682 | 32358880 ~ 32367481 (+) | True | XLOC_030206 |
| TCONS_00061735 | lncRNA | downstream | 49574 | 33332449 ~ 33338469 (+) | False | XLOC_030221 |
| TCONS_00059098 | lncRNA | downstream | 49673 | 33332548 ~ 33338466 (+) | False | XLOC_030221 |
| TCONS_00061736 | lncRNA | downstream | 49673 | 33332548 ~ 33338469 (+) | True | XLOC_030221 |
| TCONS_00061439 | lncRNA | downstream | 652744 | 33935619 ~ 33937420 (+) | True | XLOC_030228 |
| TCONS_00061442 | lncRNA | downstream | 1010386 | 34293261 ~ 34294841 (+) | False | XLOC_030229 |
| TCONS_00059089 | mRNA | upstream | 176797 | 33067283 ~ 33104366 (+) | False | XLOC_030217 |
| TCONS_00059090 | mRNA | upstream | 177118 | 33070608 ~ 33104045 (+) | True | XLOC_030217 |
| TCONS_00059087 | mRNA | upstream | 319140 | 32932357 ~ 32962023 (+) | True | XLOC_030215 |
| TCONS_00059084 | mRNA | upstream | 334908 | 32924669 ~ 32946255 (+) | False | XLOC_030215 |
| TCONS_00059083 | mRNA | upstream | 361014 | 32914321 ~ 32920149 (+) | True | XLOC_030214 |
| TCONS_00059094 | mRNA | downstream | 4736 | 33287611 ~ 33291719 (+) | False | XLOC_030219 |
| TCONS_00059095 | mRNA | downstream | 4843 | 33287718 ~ 33292251 (+) | False | XLOC_030219 |
| TCONS_00059096 | mRNA | downstream | 6182 | 33289057 ~ 33294747 (+) | True | XLOC_030219 |
| TCONS_00059097 | mRNA | downstream | 18130 | 33301005 ~ 33330923 (+) | True | XLOC_030220 |
| TCONS_00059099 | mRNA | downstream | 56887 | 33339762 ~ 33347993 (+) | True | XLOC_030222 |
| TCONS_00059088 | other | upstream | 287272 | 32993786 ~ 32993891 (+) | True | XLOC_030216 |
| TCONS_00059085 | other | upstream | 348395 | 32924918 ~ 32932768 (+) | False | XLOC_030215 |
| TCONS_00059082 | other | upstream | 394565 | 32886472 ~ 32886598 (+) | True | XLOC_030213 |
| TCONS_00059081 | other | upstream | 395277 | 32885760 ~ 32885886 (+) | True | XLOC_030211 |
| TCONS_00059080 | other | upstream | 395832 | 32885205 ~ 32885331 (+) | True | XLOC_030212 |
| TCONS_00059114 | other | downstream | 1637520 | 34920395 ~ 34921911 (+) | True | XLOC_030237 |
| TCONS_00059121 | other | downstream | 2175359 | 35458234 ~ 35461749 (+) | False | XLOC_030242 |
| TCONS_00059135 | other | downstream | 3222598 | 36505473 ~ 36506619 (+) | True | XLOC_030253 |
| TCONS_00059140 | other | downstream | 3316232 | 36599107 ~ 36609700 (+) | False | XLOC_030256 |
| TCONS_00059142 | other | downstream | 3316274 | 36599149 ~ 36605565 (+) | True | XLOC_030256 |
