Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00064475 |
| length | 771 |
| lncRNA type | retained_intron |
| GC content | 0.47 |
| exon number | 3 |
| gene id | XLOC_033188 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007117.7 |
| NCBI id | CM002890.2 |
| chromosome length | 60270059 |
| location | 52226682 ~ 52235118 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006626 | protein targeting to mitochondrion | biological_process |
| GO:0005829 | cytosol | cellular_component |
| GO:0005739 | mitochondrion | cellular_component |
| GO:0031072 | heat shock protein binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-030131-2081 | Predicted to enable heat shock protein binding activity. Predicted to be involved in protein targeting to mitochondrion. Predicted to be active in cytosol and mitochondrion. Is expressed in alar plate midbrain region; myotome; optic tectum; optic vesicle; and retina. Orthologous to human TOMM34 (translocase of outer mitochondrial membrane 34). |
| ensembl_id | ENSDART00000147754 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00065239 | lncRNA | downstream | 197206 | 52026491 ~ 52034656 (-) | True | XLOC_033186 |
| TCONS_00065238 | lncRNA | downstream | 693314 | 51528763 ~ 51538548 (-) | False | XLOC_033181 |
| TCONS_00065237 | lncRNA | downstream | 1726424 | 50495622 ~ 50505438 (-) | True | XLOC_033174 |
| TCONS_00065236 | lncRNA | downstream | 1735979 | 50480139 ~ 50495883 (-) | False | XLOC_033174 |
| TCONS_00065235 | lncRNA | downstream | 1745357 | 50480139 ~ 50486505 (-) | False | XLOC_033174 |
| TCONS_00064758 | lncRNA | upstream | 1017838 | 53252557 ~ 53258068 (-) | True | XLOC_033203 |
| TCONS_00064500 | lncRNA | upstream | 1039121 | 53273840 ~ 53282573 (-) | False | XLOC_033204 |
| TCONS_00064759 | lncRNA | upstream | 1376396 | 53611115 ~ 53690618 (-) | True | XLOC_033208 |
| TCONS_00065240 | lncRNA | upstream | 1930213 | 54164932 ~ 54173201 (-) | False | XLOC_033212 |
| TCONS_00065242 | lncRNA | upstream | 1930213 | 54164932 ~ 54174073 (-) | False | XLOC_033212 |
| TCONS_00064471 | mRNA | downstream | 75435 | 52081752 ~ 52156427 (-) | True | XLOC_033187 |
| TCONS_00064470 | mRNA | downstream | 420767 | 51796296 ~ 51811095 (-) | True | XLOC_033185 |
| TCONS_00064469 | mRNA | downstream | 460228 | 51769760 ~ 51771634 (-) | True | XLOC_033184 |
| TCONS_00064467 | mRNA | downstream | 565123 | 51575924 ~ 51666739 (-) | False | XLOC_033183 |
| TCONS_00064477 | mRNA | upstream | 104829 | 52339548 ~ 52348651 (-) | False | XLOC_033189 |
| TCONS_00064478 | mRNA | upstream | 107469 | 52342188 ~ 52348585 (-) | False | XLOC_033189 |
| TCONS_00064479 | mRNA | upstream | 111158 | 52345877 ~ 52348562 (-) | True | XLOC_033189 |
| TCONS_00064480 | mRNA | upstream | 127676 | 52362395 ~ 52428826 (-) | False | XLOC_033190 |
| TCONS_00064481 | mRNA | upstream | 129760 | 52364479 ~ 52400896 (-) | True | XLOC_033190 |
| TCONS_00064464 | other | downstream | 690374 | 51531006 ~ 51541488 (-) | True | XLOC_033181 |
| TCONS_00064457 | other | downstream | 1475414 | 50754501 ~ 50756448 (-) | True | XLOC_033179 |
| TCONS_00064456 | other | downstream | 1484317 | 50744165 ~ 50747545 (-) | True | XLOC_033178 |
| TCONS_00064455 | other | downstream | 1486607 | 50744160 ~ 50745255 (-) | False | XLOC_033178 |
| TCONS_00064454 | other | downstream | 1486933 | 50742315 ~ 50744929 (-) | False | XLOC_033178 |
| TCONS_00064491 | other | upstream | 688654 | 52923373 ~ 52923489 (-) | True | XLOC_033198 |
| TCONS_00064492 | other | upstream | 798277 | 53032996 ~ 53033111 (-) | True | XLOC_033199 |
| TCONS_00064499 | other | upstream | 1039117 | 53273836 ~ 53279930 (-) | False | XLOC_033204 |
| TCONS_00064524 | other | upstream | 2271739 | 54506458 ~ 54506586 (-) | True | XLOC_033221 |
| TCONS_00064525 | other | upstream | 2272386 | 54507105 ~ 54507178 (-) | True | XLOC_033220 |
